Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
RtcbQ99LF4 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RtcbQ99LF4 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
RtcbQ99LF4 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RtcbQ99LF4 Gm18222-201ENSMUST00000202416 1387 ntBASIC17.58■□□□□ 0.4
RtcbQ99LF4 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC17.58■□□□□ 0.4
RtcbQ99LF4 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RtcbQ99LF4 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RtcbQ99LF4 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RtcbQ99LF4 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC17.58■□□□□ 0.4
RtcbQ99LF4 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC17.58■□□□□ 0.4
RtcbQ99LF4 AC139350.3-201ENSMUST00000226151 420 ntBASIC17.58■□□□□ 0.4
RtcbQ99LF4 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
RtcbQ99LF4 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RtcbQ99LF4 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RtcbQ99LF4 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RtcbQ99LF4 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RtcbQ99LF4 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RtcbQ99LF4 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
RtcbQ99LF4 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
RtcbQ99LF4 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RtcbQ99LF4 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RtcbQ99LF4 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RtcbQ99LF4 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC17.57■□□□□ 0.4
RtcbQ99LF4 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RtcbQ99LF4 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.57■□□□□ 0.4
RtcbQ99LF4 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
RtcbQ99LF4 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RtcbQ99LF4 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RtcbQ99LF4 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
RtcbQ99LF4 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC17.57■□□□□ 0.4
RtcbQ99LF4 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RtcbQ99LF4 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC17.57■□□□□ 0.4
RtcbQ99LF4 Gm24196-201ENSMUST00000179161 110 ntBASIC17.57■□□□□ 0.4
RtcbQ99LF4 Gm8565-201ENSMUST00000183259 1014 ntBASIC17.57■□□□□ 0.4
RtcbQ99LF4 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC17.57■□□□□ 0.4
RtcbQ99LF4 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RtcbQ99LF4 Gm38671-201ENSMUST00000200573 130 ntBASIC17.57■□□□□ 0.4
RtcbQ99LF4 Gm6983-201ENSMUST00000214912 628 ntBASIC17.57■□□□□ 0.4
RtcbQ99LF4 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RtcbQ99LF4 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RtcbQ99LF4 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
RtcbQ99LF4 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
RtcbQ99LF4 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RtcbQ99LF4 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RtcbQ99LF4 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RtcbQ99LF4 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RtcbQ99LF4 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RtcbQ99LF4 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
RtcbQ99LF4 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RtcbQ99LF4 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RtcbQ99LF4 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RtcbQ99LF4 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RtcbQ99LF4 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RtcbQ99LF4 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
RtcbQ99LF4 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RtcbQ99LF4 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RtcbQ99LF4 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RtcbQ99LF4 Gm13050-201ENSMUST00000122149 1345 ntBASIC17.56■□□□□ 0.4
RtcbQ99LF4 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RtcbQ99LF4 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RtcbQ99LF4 Gm12384-201ENSMUST00000119228 919 ntBASIC17.56■□□□□ 0.4
RtcbQ99LF4 Gm16342-201ENSMUST00000124025 1025 ntBASIC17.56■□□□□ 0.4
RtcbQ99LF4 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC17.56■□□□□ 0.4
RtcbQ99LF4 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RtcbQ99LF4 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
RtcbQ99LF4 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC17.56■□□□□ 0.4
RtcbQ99LF4 Gm40466-201ENSMUST00000212174 422 ntBASIC17.56■□□□□ 0.4
RtcbQ99LF4 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RtcbQ99LF4 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RtcbQ99LF4 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RtcbQ99LF4 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RtcbQ99LF4 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
RtcbQ99LF4 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RtcbQ99LF4 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RtcbQ99LF4 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RtcbQ99LF4 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RtcbQ99LF4 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RtcbQ99LF4 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
RtcbQ99LF4 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RtcbQ99LF4 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RtcbQ99LF4 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RtcbQ99LF4 Gm21038-201ENSMUST00000222205 1383 ntBASIC17.55■□□□□ 0.4
RtcbQ99LF4 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RtcbQ99LF4 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RtcbQ99LF4 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RtcbQ99LF4 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC17.55■□□□□ 0.4
RtcbQ99LF4 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC17.55■□□□□ 0.4
RtcbQ99LF4 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
RtcbQ99LF4 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RtcbQ99LF4 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RtcbQ99LF4 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RtcbQ99LF4 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
RtcbQ99LF4 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RtcbQ99LF4 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC17.55■□□□□ 0.4
RtcbQ99LF4 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RtcbQ99LF4 Gm5187-201ENSMUST00000117317 991 ntBASIC17.55■□□□□ 0.4
RtcbQ99LF4 Gm13612-201ENSMUST00000119276 390 ntBASIC17.55■□□□□ 0.4
RtcbQ99LF4 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RtcbQ99LF4 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 107.5 ms