Protein–RNA interactions for Protein: Q99K95

Rtfdc1, Protein RTF2 homolog, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtfdc1Q99K95 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rtfdc1Q99K95 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rtfdc1Q99K95 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rtfdc1Q99K95 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rtfdc1Q99K95 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rtfdc1Q99K95 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rtfdc1Q99K95 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rtfdc1Q99K95 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rtfdc1Q99K95 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Rtfdc1Q99K95 Gm12490-201ENSMUST00000120255 560 ntBASIC15.54■□□□□ 0.08
Rtfdc1Q99K95 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rtfdc1Q99K95 Gm23984-201ENSMUST00000157139 203 ntBASIC15.54■□□□□ 0.08
Rtfdc1Q99K95 Gm31326-201ENSMUST00000191856 1048 ntBASIC15.54■□□□□ 0.08
Rtfdc1Q99K95 AC153872.1-201ENSMUST00000199539 128 ntBASIC15.54■□□□□ 0.08
Rtfdc1Q99K95 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC15.54■□□□□ 0.08
Rtfdc1Q99K95 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC15.54■□□□□ 0.08
Rtfdc1Q99K95 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rtfdc1Q99K95 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rtfdc1Q99K95 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Rtfdc1Q99K95 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rtfdc1Q99K95 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rtfdc1Q99K95 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Rtfdc1Q99K95 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rtfdc1Q99K95 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC15.54■□□□□ 0.08
Rtfdc1Q99K95 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rtfdc1Q99K95 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rtfdc1Q99K95 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rtfdc1Q99K95 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Rtfdc1Q99K95 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Rtfdc1Q99K95 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Rtfdc1Q99K95 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC15.53■□□□□ 0.08
Rtfdc1Q99K95 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rtfdc1Q99K95 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Rtfdc1Q99K95 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
Rtfdc1Q99K95 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rtfdc1Q99K95 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rtfdc1Q99K95 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
Rtfdc1Q99K95 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rtfdc1Q99K95 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Rtfdc1Q99K95 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC15.53■□□□□ 0.08
Rtfdc1Q99K95 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC15.53■□□□□ 0.08
Rtfdc1Q99K95 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC15.53■□□□□ 0.08
Rtfdc1Q99K95 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC15.53■□□□□ 0.08
Rtfdc1Q99K95 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC15.53■□□□□ 0.08
Rtfdc1Q99K95 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC15.53■□□□□ 0.08
Rtfdc1Q99K95 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Rtfdc1Q99K95 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Rtfdc1Q99K95 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC15.53■□□□□ 0.08
Rtfdc1Q99K95 AC154806.6-201ENSMUST00000228192 202 ntBASIC15.53■□□□□ 0.08
Rtfdc1Q99K95 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rtfdc1Q99K95 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rtfdc1Q99K95 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Rtfdc1Q99K95 Gm14451-201ENSMUST00000121581 1542 ntBASIC15.53■□□□□ 0.08
Rtfdc1Q99K95 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rtfdc1Q99K95 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rtfdc1Q99K95 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Rtfdc1Q99K95 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rtfdc1Q99K95 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Rtfdc1Q99K95 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rtfdc1Q99K95 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Rtfdc1Q99K95 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rtfdc1Q99K95 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Rtfdc1Q99K95 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rtfdc1Q99K95 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC15.52■□□□□ 0.08
Rtfdc1Q99K95 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC15.52■□□□□ 0.08
Rtfdc1Q99K95 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC15.52■□□□□ 0.08
Rtfdc1Q99K95 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Rtfdc1Q99K95 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Rtfdc1Q99K95 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
Rtfdc1Q99K95 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC15.52■□□□□ 0.08
Rtfdc1Q99K95 AC102291.3-201ENSMUST00000226566 405 ntBASIC15.52■□□□□ 0.08
Rtfdc1Q99K95 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rtfdc1Q99K95 Gm6180-201ENSMUST00000065243 498 ntBASIC15.52■□□□□ 0.08
Rtfdc1Q99K95 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Rtfdc1Q99K95 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rtfdc1Q99K95 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC15.52■□□□□ 0.08
Rtfdc1Q99K95 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Rtfdc1Q99K95 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rtfdc1Q99K95 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.07
Rtfdc1Q99K95 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rtfdc1Q99K95 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rtfdc1Q99K95 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Rtfdc1Q99K95 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Rtfdc1Q99K95 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rtfdc1Q99K95 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rtfdc1Q99K95 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rtfdc1Q99K95 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rtfdc1Q99K95 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Rtfdc1Q99K95 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC15.51■□□□□ 0.07
Rtfdc1Q99K95 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rtfdc1Q99K95 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rtfdc1Q99K95 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC15.51■□□□□ 0.07
Rtfdc1Q99K95 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC15.51■□□□□ 0.07
Rtfdc1Q99K95 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC15.51■□□□□ 0.07
Rtfdc1Q99K95 Gm28631-201ENSMUST00000190740 334 ntBASIC15.51■□□□□ 0.07
Rtfdc1Q99K95 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC15.51■□□□□ 0.07
Rtfdc1Q99K95 Gm6745-201ENSMUST00000199216 526 ntBASIC15.51■□□□□ 0.07
Rtfdc1Q99K95 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC15.51■□□□□ 0.07
Rtfdc1Q99K95 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC15.51■□□□□ 0.07
Rtfdc1Q99K95 AC154239.3-201ENSMUST00000226933 674 ntBASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms