Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC15.02■□□□□ -0
Pcdha3Q91Y16 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Pcdha3Q91Y16 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdha3Q91Y16 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC15.02■□□□□ -0
Pcdha3Q91Y16 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdha3Q91Y16 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Pcdha3Q91Y16 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
Pcdha3Q91Y16 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Pcdha3Q91Y16 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC15.02□□□□□ -0.01
Pcdha3Q91Y16 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdha3Q91Y16 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdha3Q91Y16 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdha3Q91Y16 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdha3Q91Y16 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdha3Q91Y16 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC15.01□□□□□ -0.01
Pcdha3Q91Y16 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Pcdha3Q91Y16 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdha3Q91Y16 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdha3Q91Y16 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdha3Q91Y16 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdha3Q91Y16 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdha3Q91Y16 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdha3Q91Y16 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdha3Q91Y16 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdha3Q91Y16 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdha3Q91Y16 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdha3Q91Y16 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC15.01□□□□□ -0.01
Pcdha3Q91Y16 Gm15920-201ENSMUST00000118998 402 ntBASIC15.01□□□□□ -0.01
Pcdha3Q91Y16 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
Pcdha3Q91Y16 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC15.01□□□□□ -0.01
Pcdha3Q91Y16 Gm18049-201ENSMUST00000208909 581 ntBASIC15.01□□□□□ -0.01
Pcdha3Q91Y16 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC15.01□□□□□ -0.01
Pcdha3Q91Y16 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdha3Q91Y16 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Pcdha3Q91Y16 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdha3Q91Y16 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdha3Q91Y16 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Pcdha3Q91Y16 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdha3Q91Y16 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdha3Q91Y16 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Pcdha3Q91Y16 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdha3Q91Y16 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdha3Q91Y16 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdha3Q91Y16 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdha3Q91Y16 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdha3Q91Y16 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdha3Q91Y16 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdha3Q91Y16 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdha3Q91Y16 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdha3Q91Y16 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdha3Q91Y16 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdha3Q91Y16 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdha3Q91Y16 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdha3Q91Y16 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdha3Q91Y16 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdha3Q91Y16 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC15□□□□□ -0.01
Pcdha3Q91Y16 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdha3Q91Y16 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdha3Q91Y16 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdha3Q91Y16 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdha3Q91Y16 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdha3Q91Y16 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Pcdha3Q91Y16 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdha3Q91Y16 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdha3Q91Y16 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC15□□□□□ -0.01
Pcdha3Q91Y16 Gm27430-201ENSMUST00000184585 107 ntBASIC15□□□□□ -0.01
Pcdha3Q91Y16 Gm44333-201ENSMUST00000197168 107 ntBASIC15□□□□□ -0.01
Pcdha3Q91Y16 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC15□□□□□ -0.01
Pcdha3Q91Y16 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdha3Q91Y16 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdha3Q91Y16 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdha3Q91Y16 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdha3Q91Y16 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdha3Q91Y16 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC15□□□□□ -0.01
Pcdha3Q91Y16 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdha3Q91Y16 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdha3Q91Y16 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdha3Q91Y16 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
Pcdha3Q91Y16 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Pcdha3Q91Y16 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC15□□□□□ -0.01
Pcdha3Q91Y16 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdha3Q91Y16 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdha3Q91Y16 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdha3Q91Y16 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdha3Q91Y16 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdha3Q91Y16 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Pcdha3Q91Y16 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdha3Q91Y16 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdha3Q91Y16 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdha3Q91Y16 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdha3Q91Y16 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdha3Q91Y16 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdha3Q91Y16 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdha3Q91Y16 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdha3Q91Y16 Fgf17-202ENSMUST00000227123 1336 ntBASIC14.99□□□□□ -0.01
Pcdha3Q91Y16 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdha3Q91Y16 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdha3Q91Y16 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdha3Q91Y16 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdha3Q91Y16 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms