Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb5Q91XZ5 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb5Q91XZ5 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
Pcdhb5Q91XZ5 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb5Q91XZ5 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC16.84■□□□□ 0.29
Pcdhb5Q91XZ5 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb5Q91XZ5 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
Pcdhb5Q91XZ5 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb5Q91XZ5 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC16.84■□□□□ 0.29
Pcdhb5Q91XZ5 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb5Q91XZ5 AC149294.4-201ENSMUST00000227870 882 ntBASIC16.84■□□□□ 0.29
Pcdhb5Q91XZ5 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC16.84■□□□□ 0.29
Pcdhb5Q91XZ5 Carlr-201ENSMUST00000181515 2574 ntBASIC16.84■□□□□ 0.29
Pcdhb5Q91XZ5 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb5Q91XZ5 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Pcdhb5Q91XZ5 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
Pcdhb5Q91XZ5 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC16.84■□□□□ 0.29
Pcdhb5Q91XZ5 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb5Q91XZ5 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb5Q91XZ5 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb5Q91XZ5 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb5Q91XZ5 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb5Q91XZ5 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb5Q91XZ5 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb5Q91XZ5 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb5Q91XZ5 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC16.84■□□□□ 0.29
Pcdhb5Q91XZ5 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb5Q91XZ5 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Pcdhb5Q91XZ5 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Pcdhb5Q91XZ5 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Pcdhb5Q91XZ5 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Pcdhb5Q91XZ5 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Pcdhb5Q91XZ5 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb5Q91XZ5 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb5Q91XZ5 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb5Q91XZ5 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb5Q91XZ5 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC16.83■□□□□ 0.28
Pcdhb5Q91XZ5 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC16.83■□□□□ 0.28
Pcdhb5Q91XZ5 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb5Q91XZ5 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb5Q91XZ5 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb5Q91XZ5 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Pcdhb5Q91XZ5 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb5Q91XZ5 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb5Q91XZ5 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb5Q91XZ5 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb5Q91XZ5 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb5Q91XZ5 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb5Q91XZ5 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb5Q91XZ5 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Pcdhb5Q91XZ5 Gm42690-201ENSMUST00000197921 1836 ntBASIC16.82■□□□□ 0.28
Pcdhb5Q91XZ5 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb5Q91XZ5 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb5Q91XZ5 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb5Q91XZ5 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC16.82■□□□□ 0.28
Pcdhb5Q91XZ5 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb5Q91XZ5 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb5Q91XZ5 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Pcdhb5Q91XZ5 Gm15806-201ENSMUST00000120696 955 ntBASIC16.82■□□□□ 0.28
Pcdhb5Q91XZ5 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb5Q91XZ5 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC16.82■□□□□ 0.28
Pcdhb5Q91XZ5 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC16.82■□□□□ 0.28
Pcdhb5Q91XZ5 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC16.82■□□□□ 0.28
Pcdhb5Q91XZ5 Gm5425-201ENSMUST00000214125 459 ntBASIC16.82■□□□□ 0.28
Pcdhb5Q91XZ5 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb5Q91XZ5 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb5Q91XZ5 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb5Q91XZ5 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Pcdhb5Q91XZ5 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb5Q91XZ5 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC16.82■□□□□ 0.28
Pcdhb5Q91XZ5 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb5Q91XZ5 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb5Q91XZ5 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb5Q91XZ5 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb5Q91XZ5 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb5Q91XZ5 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb5Q91XZ5 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
Pcdhb5Q91XZ5 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb5Q91XZ5 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb5Q91XZ5 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb5Q91XZ5 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb5Q91XZ5 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb5Q91XZ5 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb5Q91XZ5 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb5Q91XZ5 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Pcdhb5Q91XZ5 Gm12960-201ENSMUST00000120017 1066 ntBASIC16.81■□□□□ 0.28
Pcdhb5Q91XZ5 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC16.81■□□□□ 0.28
Pcdhb5Q91XZ5 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb5Q91XZ5 Gm44608-201ENSMUST00000206827 855 ntBASIC16.81■□□□□ 0.28
Pcdhb5Q91XZ5 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb5Q91XZ5 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb5Q91XZ5 Efs-202ENSMUST00000227037 2540 ntBASIC16.81■□□□□ 0.28
Pcdhb5Q91XZ5 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb5Q91XZ5 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Pcdhb5Q91XZ5 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb5Q91XZ5 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb5Q91XZ5 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb5Q91XZ5 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb5Q91XZ5 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb5Q91XZ5 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms