Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Gm9109-201ENSMUST00000120254 1405 ntBASIC14.74□□□□□ -0.05
Pcdhb6Q91XZ4 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb6Q91XZ4 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb6Q91XZ4 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb6Q91XZ4 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb6Q91XZ4 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb6Q91XZ4 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
Pcdhb6Q91XZ4 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb6Q91XZ4 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb6Q91XZ4 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb6Q91XZ4 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb6Q91XZ4 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb6Q91XZ4 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC14.73□□□□□ -0.05
Pcdhb6Q91XZ4 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb6Q91XZ4 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb6Q91XZ4 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb6Q91XZ4 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Pcdhb6Q91XZ4 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
Pcdhb6Q91XZ4 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb6Q91XZ4 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb6Q91XZ4 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Pcdhb6Q91XZ4 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb6Q91XZ4 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb6Q91XZ4 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb6Q91XZ4 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC14.73□□□□□ -0.05
Pcdhb6Q91XZ4 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Pcdhb6Q91XZ4 Gm13823-201ENSMUST00000119930 345 ntBASIC14.73□□□□□ -0.05
Pcdhb6Q91XZ4 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb6Q91XZ4 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb6Q91XZ4 AC151286.1-201ENSMUST00000198489 145 ntBASIC14.73□□□□□ -0.05
Pcdhb6Q91XZ4 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb6Q91XZ4 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb6Q91XZ4 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb6Q91XZ4 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.73□□□□□ -0.05
Pcdhb6Q91XZ4 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb6Q91XZ4 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb6Q91XZ4 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb6Q91XZ4 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb6Q91XZ4 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb6Q91XZ4 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb6Q91XZ4 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb6Q91XZ4 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb6Q91XZ4 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb6Q91XZ4 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb6Q91XZ4 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC14.73□□□□□ -0.05
Pcdhb6Q91XZ4 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb6Q91XZ4 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC14.73□□□□□ -0.05
Pcdhb6Q91XZ4 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb6Q91XZ4 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb6Q91XZ4 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb6Q91XZ4 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC14.72□□□□□ -0.05
Pcdhb6Q91XZ4 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb6Q91XZ4 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb6Q91XZ4 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb6Q91XZ4 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb6Q91XZ4 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb6Q91XZ4 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
Pcdhb6Q91XZ4 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb6Q91XZ4 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC14.72□□□□□ -0.05
Pcdhb6Q91XZ4 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC14.72□□□□□ -0.05
Pcdhb6Q91XZ4 Gm9824-201ENSMUST00000178707 561 ntBASIC14.72□□□□□ -0.05
Pcdhb6Q91XZ4 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb6Q91XZ4 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb6Q91XZ4 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb6Q91XZ4 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb6Q91XZ4 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb6Q91XZ4 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb6Q91XZ4 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Pcdhb6Q91XZ4 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb6Q91XZ4 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb6Q91XZ4 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb6Q91XZ4 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb6Q91XZ4 AC121801.1-201ENSMUST00000225363 1899 ntBASIC14.72□□□□□ -0.05
Pcdhb6Q91XZ4 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Pcdhb6Q91XZ4 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Pcdhb6Q91XZ4 BC001981-202ENSMUST00000191393 1545 ntBASIC14.71□□□□□ -0.05
Pcdhb6Q91XZ4 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhb6Q91XZ4 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhb6Q91XZ4 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhb6Q91XZ4 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Pcdhb6Q91XZ4 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhb6Q91XZ4 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhb6Q91XZ4 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhb6Q91XZ4 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhb6Q91XZ4 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Pcdhb6Q91XZ4 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhb6Q91XZ4 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Pcdhb6Q91XZ4 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhb6Q91XZ4 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhb6Q91XZ4 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhb6Q91XZ4 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
Pcdhb6Q91XZ4 Gm15957-201ENSMUST00000118893 974 ntBASIC14.71□□□□□ -0.05
Pcdhb6Q91XZ4 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhb6Q91XZ4 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhb6Q91XZ4 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC14.71□□□□□ -0.05
Pcdhb6Q91XZ4 Gm2213-201ENSMUST00000197485 688 ntBASIC14.71□□□□□ -0.05
Pcdhb6Q91XZ4 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC14.71□□□□□ -0.05
Pcdhb6Q91XZ4 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhb6Q91XZ4 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhb6Q91XZ4 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms