Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Vsx1Q91V10 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vsx1Q91V10 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vsx1Q91V10 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vsx1Q91V10 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vsx1Q91V10 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
Vsx1Q91V10 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vsx1Q91V10 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vsx1Q91V10 Gm12390-201ENSMUST00000117897 397 ntBASIC14.16□□□□□ -0.14
Vsx1Q91V10 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC14.16□□□□□ -0.14
Vsx1Q91V10 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC14.16□□□□□ -0.14
Vsx1Q91V10 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC14.16□□□□□ -0.14
Vsx1Q91V10 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vsx1Q91V10 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Vsx1Q91V10 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vsx1Q91V10 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vsx1Q91V10 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vsx1Q91V10 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Vsx1Q91V10 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vsx1Q91V10 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vsx1Q91V10 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vsx1Q91V10 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vsx1Q91V10 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Vsx1Q91V10 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vsx1Q91V10 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vsx1Q91V10 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vsx1Q91V10 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
Vsx1Q91V10 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vsx1Q91V10 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Vsx1Q91V10 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vsx1Q91V10 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vsx1Q91V10 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Vsx1Q91V10 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Vsx1Q91V10 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Vsx1Q91V10 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vsx1Q91V10 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vsx1Q91V10 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vsx1Q91V10 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Vsx1Q91V10 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Vsx1Q91V10 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vsx1Q91V10 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Vsx1Q91V10 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Vsx1Q91V10 Gm45098-201ENSMUST00000207179 657 ntBASIC14.15□□□□□ -0.14
Vsx1Q91V10 AC150560.1-201ENSMUST00000227731 1187 ntBASIC14.15□□□□□ -0.14
Vsx1Q91V10 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vsx1Q91V10 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Vsx1Q91V10 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vsx1Q91V10 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vsx1Q91V10 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.15□□□□□ -0.14
Vsx1Q91V10 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vsx1Q91V10 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Vsx1Q91V10 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC14.15□□□□□ -0.14
Vsx1Q91V10 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC14.15□□□□□ -0.14
Vsx1Q91V10 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Vsx1Q91V10 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Vsx1Q91V10 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vsx1Q91V10 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vsx1Q91V10 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vsx1Q91V10 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.14□□□□□ -0.15
Vsx1Q91V10 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.14□□□□□ -0.15
Vsx1Q91V10 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vsx1Q91V10 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vsx1Q91V10 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vsx1Q91V10 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vsx1Q91V10 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vsx1Q91V10 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Vsx1Q91V10 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Vsx1Q91V10 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vsx1Q91V10 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Vsx1Q91V10 Gm13392-201ENSMUST00000117708 150 ntBASIC14.14□□□□□ -0.15
Vsx1Q91V10 Gm12341-201ENSMUST00000119724 503 ntBASIC14.14□□□□□ -0.15
Vsx1Q91V10 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC14.14□□□□□ -0.15
Vsx1Q91V10 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Vsx1Q91V10 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC14.14□□□□□ -0.15
Vsx1Q91V10 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Vsx1Q91V10 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vsx1Q91V10 AC156016.3-201ENSMUST00000228623 344 ntBASIC14.14□□□□□ -0.15
Vsx1Q91V10 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC14.14□□□□□ -0.15
Vsx1Q91V10 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Vsx1Q91V10 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vsx1Q91V10 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vsx1Q91V10 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Vsx1Q91V10 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Vsx1Q91V10 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vsx1Q91V10 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vsx1Q91V10 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Vsx1Q91V10 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Vsx1Q91V10 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vsx1Q91V10 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vsx1Q91V10 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC14.13□□□□□ -0.15
Vsx1Q91V10 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Vsx1Q91V10 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Vsx1Q91V10 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vsx1Q91V10 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC14.13□□□□□ -0.15
Vsx1Q91V10 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Vsx1Q91V10 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC14.13□□□□□ -0.15
Vsx1Q91V10 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Vsx1Q91V10 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC14.13□□□□□ -0.15
Vsx1Q91V10 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vsx1Q91V10 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms