Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tram1Q91V04 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Tram1Q91V04 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Tram1Q91V04 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tram1Q91V04 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tram1Q91V04 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Tram1Q91V04 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tram1Q91V04 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tram1Q91V04 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tram1Q91V04 Gm12626-201ENSMUST00000117339 1983 ntBASIC12.33□□□□□ -0.44
Tram1Q91V04 Gm12623-201ENSMUST00000119849 1983 ntBASIC12.33□□□□□ -0.44
Tram1Q91V04 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Tram1Q91V04 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Tram1Q91V04 Gm25925-201ENSMUST00000158314 306 ntBASIC12.33□□□□□ -0.44
Tram1Q91V04 Gm8584-201ENSMUST00000171982 758 ntBASIC12.33□□□□□ -0.44
Tram1Q91V04 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Tram1Q91V04 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tram1Q91V04 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tram1Q91V04 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Tram1Q91V04 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Tram1Q91V04 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Tram1Q91V04 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tram1Q91V04 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tram1Q91V04 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC12.33□□□□□ -0.44
Tram1Q91V04 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tram1Q91V04 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tram1Q91V04 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tram1Q91V04 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.32□□□□□ -0.44
Tram1Q91V04 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Tram1Q91V04 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Tram1Q91V04 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tram1Q91V04 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tram1Q91V04 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tram1Q91V04 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tram1Q91V04 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tram1Q91V04 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tram1Q91V04 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tram1Q91V04 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Tram1Q91V04 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Tram1Q91V04 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC12.32□□□□□ -0.44
Tram1Q91V04 Gm6944-201ENSMUST00000182449 1006 ntBASIC12.32□□□□□ -0.44
Tram1Q91V04 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Tram1Q91V04 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC12.32□□□□□ -0.44
Tram1Q91V04 AC153889.1-201ENSMUST00000219257 330 ntBASIC12.32□□□□□ -0.44
Tram1Q91V04 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tram1Q91V04 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tram1Q91V04 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Tram1Q91V04 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Tram1Q91V04 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tram1Q91V04 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tram1Q91V04 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tram1Q91V04 Gm37411-201ENSMUST00000194180 2282 ntBASIC12.32□□□□□ -0.44
Tram1Q91V04 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tram1Q91V04 Gm43364-201ENSMUST00000196046 3274 ntBASIC12.32□□□□□ -0.44
Tram1Q91V04 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Tram1Q91V04 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Tram1Q91V04 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Tram1Q91V04 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tram1Q91V04 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tram1Q91V04 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Tram1Q91V04 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tram1Q91V04 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Tram1Q91V04 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Tram1Q91V04 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Tram1Q91V04 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tram1Q91V04 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tram1Q91V04 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tram1Q91V04 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC12.31□□□□□ -0.44
Tram1Q91V04 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC12.31□□□□□ -0.44
Tram1Q91V04 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Tram1Q91V04 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tram1Q91V04 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tram1Q91V04 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tram1Q91V04 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tram1Q91V04 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tram1Q91V04 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC12.31□□□□□ -0.44
Tram1Q91V04 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Tram1Q91V04 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tram1Q91V04 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Tram1Q91V04 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC12.31□□□□□ -0.44
Tram1Q91V04 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tram1Q91V04 Rbfox2-207ENSMUST00000227533 1041 ntBASIC12.31□□□□□ -0.44
Tram1Q91V04 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tram1Q91V04 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tram1Q91V04 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tram1Q91V04 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Tram1Q91V04 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tram1Q91V04 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Tram1Q91V04 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tram1Q91V04 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tram1Q91V04 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tram1Q91V04 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tram1Q91V04 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tram1Q91V04 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.31□□□□□ -0.44
Tram1Q91V04 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tram1Q91V04 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC12.31□□□□□ -0.44
Tram1Q91V04 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Tram1Q91V04 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tram1Q91V04 Gm38102-201ENSMUST00000192791 1935 ntBASIC12.31□□□□□ -0.44
Tram1Q91V04 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms