Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rpa1Q8VEE4 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rpa1Q8VEE4 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rpa1Q8VEE4 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Rpa1Q8VEE4 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rpa1Q8VEE4 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rpa1Q8VEE4 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rpa1Q8VEE4 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Rpa1Q8VEE4 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rpa1Q8VEE4 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rpa1Q8VEE4 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rpa1Q8VEE4 Gm12895-201ENSMUST00000122214 226 ntBASIC14.46□□□□□ -0.09
Rpa1Q8VEE4 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rpa1Q8VEE4 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC14.46□□□□□ -0.09
Rpa1Q8VEE4 Rbfox2-207ENSMUST00000227533 1041 ntBASIC14.46□□□□□ -0.09
Rpa1Q8VEE4 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rpa1Q8VEE4 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Rpa1Q8VEE4 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Rpa1Q8VEE4 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Rpa1Q8VEE4 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rpa1Q8VEE4 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Rpa1Q8VEE4 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rpa1Q8VEE4 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rpa1Q8VEE4 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rpa1Q8VEE4 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rpa1Q8VEE4 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Rpa1Q8VEE4 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
Rpa1Q8VEE4 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Rpa1Q8VEE4 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Rpa1Q8VEE4 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Rpa1Q8VEE4 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Rpa1Q8VEE4 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Rpa1Q8VEE4 Grk6-205ENSMUST00000224653 2976 ntBASIC14.46□□□□□ -0.1
Rpa1Q8VEE4 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Rpa1Q8VEE4 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC14.46□□□□□ -0.1
Rpa1Q8VEE4 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Rpa1Q8VEE4 Gm44065-201ENSMUST00000203184 3527 ntBASIC14.45□□□□□ -0.1
Rpa1Q8VEE4 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rpa1Q8VEE4 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rpa1Q8VEE4 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rpa1Q8VEE4 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rpa1Q8VEE4 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rpa1Q8VEE4 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Rpa1Q8VEE4 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rpa1Q8VEE4 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Rpa1Q8VEE4 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rpa1Q8VEE4 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rpa1Q8VEE4 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Rpa1Q8VEE4 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rpa1Q8VEE4 Gm11405-201ENSMUST00000118689 1556 ntBASIC14.45□□□□□ -0.1
Rpa1Q8VEE4 Gm9103-201ENSMUST00000119371 405 ntBASIC14.45□□□□□ -0.1
Rpa1Q8VEE4 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC14.45□□□□□ -0.1
Rpa1Q8VEE4 Gm5253-201ENSMUST00000187104 1025 ntBASIC14.45□□□□□ -0.1
Rpa1Q8VEE4 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rpa1Q8VEE4 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC14.45□□□□□ -0.1
Rpa1Q8VEE4 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rpa1Q8VEE4 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rpa1Q8VEE4 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rpa1Q8VEE4 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Rpa1Q8VEE4 Gm25007-201ENSMUST00000083808 133 ntBASIC14.45□□□□□ -0.1
Rpa1Q8VEE4 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rpa1Q8VEE4 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Rpa1Q8VEE4 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rpa1Q8VEE4 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC14.45□□□□□ -0.1
Rpa1Q8VEE4 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rpa1Q8VEE4 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rpa1Q8VEE4 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC14.45□□□□□ -0.1
Rpa1Q8VEE4 Gm37644-201ENSMUST00000192190 2270 ntBASIC14.45□□□□□ -0.1
Rpa1Q8VEE4 Gm37411-201ENSMUST00000194180 2282 ntBASIC14.45□□□□□ -0.1
Rpa1Q8VEE4 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC14.45□□□□□ -0.1
Rpa1Q8VEE4 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rpa1Q8VEE4 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rpa1Q8VEE4 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Rpa1Q8VEE4 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Rpa1Q8VEE4 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rpa1Q8VEE4 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rpa1Q8VEE4 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rpa1Q8VEE4 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rpa1Q8VEE4 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rpa1Q8VEE4 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rpa1Q8VEE4 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC14.45□□□□□ -0.1
Rpa1Q8VEE4 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rpa1Q8VEE4 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Rpa1Q8VEE4 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Rpa1Q8VEE4 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC14.44□□□□□ -0.1
Rpa1Q8VEE4 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rpa1Q8VEE4 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rpa1Q8VEE4 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rpa1Q8VEE4 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rpa1Q8VEE4 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Rpa1Q8VEE4 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Rpa1Q8VEE4 Gm5639-201ENSMUST00000122305 2403 ntBASIC14.44□□□□□ -0.1
Rpa1Q8VEE4 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Rpa1Q8VEE4 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Rpa1Q8VEE4 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Rpa1Q8VEE4 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rpa1Q8VEE4 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rpa1Q8VEE4 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rpa1Q8VEE4 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rpa1Q8VEE4 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms