Protein–RNA interactions for Protein: Q8R1M2

H2afj, Histone H2A.J, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afjQ8R1M2 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
H2afjQ8R1M2 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
H2afjQ8R1M2 AC154527.4-201ENSMUST00000224364 1667 ntBASIC13.34□□□□□ -0.27
H2afjQ8R1M2 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
H2afjQ8R1M2 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
H2afjQ8R1M2 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
H2afjQ8R1M2 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
H2afjQ8R1M2 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
H2afjQ8R1M2 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
H2afjQ8R1M2 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
H2afjQ8R1M2 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.27
H2afjQ8R1M2 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
H2afjQ8R1M2 Gm8096-201ENSMUST00000209921 1591 ntBASIC13.33□□□□□ -0.28
H2afjQ8R1M2 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
H2afjQ8R1M2 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC13.33□□□□□ -0.28
H2afjQ8R1M2 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
H2afjQ8R1M2 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
H2afjQ8R1M2 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
H2afjQ8R1M2 Trav13-3-201ENSMUST00000117226 336 ntBASIC13.33□□□□□ -0.28
H2afjQ8R1M2 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
H2afjQ8R1M2 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC13.33□□□□□ -0.28
H2afjQ8R1M2 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
H2afjQ8R1M2 Gm27300-201ENSMUST00000184085 97 ntBASIC13.33□□□□□ -0.28
H2afjQ8R1M2 Gm27335-201ENSMUST00000184758 97 ntBASIC13.33□□□□□ -0.28
H2afjQ8R1M2 Mir7036b-201ENSMUST00000184791 63 ntBASIC13.33□□□□□ -0.28
H2afjQ8R1M2 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC13.33□□□□□ -0.28
H2afjQ8R1M2 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
H2afjQ8R1M2 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
H2afjQ8R1M2 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
H2afjQ8R1M2 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
H2afjQ8R1M2 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC13.33□□□□□ -0.28
H2afjQ8R1M2 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC13.33□□□□□ -0.28
H2afjQ8R1M2 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
H2afjQ8R1M2 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
H2afjQ8R1M2 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC13.33□□□□□ -0.28
H2afjQ8R1M2 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
H2afjQ8R1M2 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13.33□□□□□ -0.28
H2afjQ8R1M2 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
H2afjQ8R1M2 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC13.33□□□□□ -0.28
H2afjQ8R1M2 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
H2afjQ8R1M2 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
H2afjQ8R1M2 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
H2afjQ8R1M2 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
H2afjQ8R1M2 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
H2afjQ8R1M2 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
H2afjQ8R1M2 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
H2afjQ8R1M2 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC13.32□□□□□ -0.28
H2afjQ8R1M2 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
H2afjQ8R1M2 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
H2afjQ8R1M2 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
H2afjQ8R1M2 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
H2afjQ8R1M2 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
H2afjQ8R1M2 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
H2afjQ8R1M2 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
H2afjQ8R1M2 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
H2afjQ8R1M2 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
H2afjQ8R1M2 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
H2afjQ8R1M2 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
H2afjQ8R1M2 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
H2afjQ8R1M2 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
H2afjQ8R1M2 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
H2afjQ8R1M2 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC13.32□□□□□ -0.28
H2afjQ8R1M2 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
H2afjQ8R1M2 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC13.32□□□□□ -0.28
H2afjQ8R1M2 Gm18733-201ENSMUST00000173950 856 ntBASIC13.32□□□□□ -0.28
H2afjQ8R1M2 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC13.32□□□□□ -0.28
H2afjQ8R1M2 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC13.32□□□□□ -0.28
H2afjQ8R1M2 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
H2afjQ8R1M2 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
H2afjQ8R1M2 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
H2afjQ8R1M2 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
H2afjQ8R1M2 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
H2afjQ8R1M2 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
H2afjQ8R1M2 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
H2afjQ8R1M2 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
H2afjQ8R1M2 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
H2afjQ8R1M2 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
H2afjQ8R1M2 AC121805.2-201ENSMUST00000218808 2538 ntBASIC13.32□□□□□ -0.28
H2afjQ8R1M2 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
H2afjQ8R1M2 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
H2afjQ8R1M2 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
H2afjQ8R1M2 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
H2afjQ8R1M2 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
H2afjQ8R1M2 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
H2afjQ8R1M2 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
H2afjQ8R1M2 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
H2afjQ8R1M2 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
H2afjQ8R1M2 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC13.31□□□□□ -0.28
H2afjQ8R1M2 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
H2afjQ8R1M2 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
H2afjQ8R1M2 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.31□□□□□ -0.28
H2afjQ8R1M2 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
H2afjQ8R1M2 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
H2afjQ8R1M2 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
H2afjQ8R1M2 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC13.31□□□□□ -0.28
H2afjQ8R1M2 Gm12350-201ENSMUST00000121208 462 ntBASIC13.31□□□□□ -0.28
H2afjQ8R1M2 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC13.31□□□□□ -0.28
H2afjQ8R1M2 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
H2afjQ8R1M2 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC13.31□□□□□ -0.28
H2afjQ8R1M2 Gm2272-201ENSMUST00000194903 582 ntBASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms