Protein–RNA interactions for Protein: Q8K5B8

Hoxc12, Homeobox protein Hox-C12, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc12Q8K5B8 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxc12Q8K5B8 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxc12Q8K5B8 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxc12Q8K5B8 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxc12Q8K5B8 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxc12Q8K5B8 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxc12Q8K5B8 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxc12Q8K5B8 Ankra2-208ENSMUST00000226100 1476 ntBASIC12.03□□□□□ -0.48
Hoxc12Q8K5B8 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxc12Q8K5B8 Gm45212-201ENSMUST00000205831 3403 ntBASIC12.03□□□□□ -0.48
Hoxc12Q8K5B8 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC12.03□□□□□ -0.48
Hoxc12Q8K5B8 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxc12Q8K5B8 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC12.03□□□□□ -0.48
Hoxc12Q8K5B8 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxc12Q8K5B8 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxc12Q8K5B8 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxc12Q8K5B8 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxc12Q8K5B8 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Hoxc12Q8K5B8 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Hoxc12Q8K5B8 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxc12Q8K5B8 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
Hoxc12Q8K5B8 Gm8410-201ENSMUST00000117225 605 ntBASIC12.03□□□□□ -0.48
Hoxc12Q8K5B8 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC12.03□□□□□ -0.48
Hoxc12Q8K5B8 Gm27618-201ENSMUST00000183671 60 ntBASIC12.03□□□□□ -0.48
Hoxc12Q8K5B8 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxc12Q8K5B8 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxc12Q8K5B8 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxc12Q8K5B8 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC12.03□□□□□ -0.48
Hoxc12Q8K5B8 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxc12Q8K5B8 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxc12Q8K5B8 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxc12Q8K5B8 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxc12Q8K5B8 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxc12Q8K5B8 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxc12Q8K5B8 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxc12Q8K5B8 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxc12Q8K5B8 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
Hoxc12Q8K5B8 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxc12Q8K5B8 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxc12Q8K5B8 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxc12Q8K5B8 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hoxc12Q8K5B8 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Hoxc12Q8K5B8 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.02□□□□□ -0.48
Hoxc12Q8K5B8 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hoxc12Q8K5B8 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hoxc12Q8K5B8 Gm42901-201ENSMUST00000197735 3171 ntBASIC12.02□□□□□ -0.48
Hoxc12Q8K5B8 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hoxc12Q8K5B8 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hoxc12Q8K5B8 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hoxc12Q8K5B8 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hoxc12Q8K5B8 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hoxc12Q8K5B8 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxc12Q8K5B8 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Hoxc12Q8K5B8 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxc12Q8K5B8 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Hoxc12Q8K5B8 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxc12Q8K5B8 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.02□□□□□ -0.49
Hoxc12Q8K5B8 Gm38577-201ENSMUST00000221531 4545 ntBASIC12.02□□□□□ -0.49
Hoxc12Q8K5B8 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxc12Q8K5B8 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxc12Q8K5B8 Gm13823-201ENSMUST00000119930 345 ntBASIC12.02□□□□□ -0.49
Hoxc12Q8K5B8 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxc12Q8K5B8 Gm9719-201ENSMUST00000162765 543 ntBASIC12.02□□□□□ -0.49
Hoxc12Q8K5B8 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Hoxc12Q8K5B8 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC12.02□□□□□ -0.49
Hoxc12Q8K5B8 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxc12Q8K5B8 Mir7684-201ENSMUST00000183858 60 ntBASIC12.02□□□□□ -0.49
Hoxc12Q8K5B8 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxc12Q8K5B8 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxc12Q8K5B8 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC12.02□□□□□ -0.49
Hoxc12Q8K5B8 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC12.02□□□□□ -0.49
Hoxc12Q8K5B8 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC12.02□□□□□ -0.49
Hoxc12Q8K5B8 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxc12Q8K5B8 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Hoxc12Q8K5B8 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Hoxc12Q8K5B8 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC12.02□□□□□ -0.49
Hoxc12Q8K5B8 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxc12Q8K5B8 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxc12Q8K5B8 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxc12Q8K5B8 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxc12Q8K5B8 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxc12Q8K5B8 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxc12Q8K5B8 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxc12Q8K5B8 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxc12Q8K5B8 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Hoxc12Q8K5B8 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxc12Q8K5B8 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Hoxc12Q8K5B8 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC12.02□□□□□ -0.49
Hoxc12Q8K5B8 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxc12Q8K5B8 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxc12Q8K5B8 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxc12Q8K5B8 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxc12Q8K5B8 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxc12Q8K5B8 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxc12Q8K5B8 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxc12Q8K5B8 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC12.02□□□□□ -0.49
Hoxc12Q8K5B8 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxc12Q8K5B8 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxc12Q8K5B8 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxc12Q8K5B8 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms