Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Sf3a1Q8K4Z5 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sf3a1Q8K4Z5 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Sf3a1Q8K4Z5 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sf3a1Q8K4Z5 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC17.56■□□□□ 0.4
Sf3a1Q8K4Z5 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sf3a1Q8K4Z5 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Sf3a1Q8K4Z5 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Sf3a1Q8K4Z5 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sf3a1Q8K4Z5 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sf3a1Q8K4Z5 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
Sf3a1Q8K4Z5 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC17.56■□□□□ 0.4
Sf3a1Q8K4Z5 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC17.56■□□□□ 0.4
Sf3a1Q8K4Z5 AC139382.1-201ENSMUST00000221402 498 ntBASIC17.56■□□□□ 0.4
Sf3a1Q8K4Z5 AC124732.2-201ENSMUST00000221977 316 ntBASIC17.56■□□□□ 0.4
Sf3a1Q8K4Z5 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sf3a1Q8K4Z5 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sf3a1Q8K4Z5 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Sf3a1Q8K4Z5 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sf3a1Q8K4Z5 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sf3a1Q8K4Z5 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Sf3a1Q8K4Z5 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sf3a1Q8K4Z5 Gm12620-201ENSMUST00000119791 1986 ntBASIC17.55■□□□□ 0.4
Sf3a1Q8K4Z5 Gm12612-201ENSMUST00000140182 1986 ntBASIC17.55■□□□□ 0.4
Sf3a1Q8K4Z5 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sf3a1Q8K4Z5 Gm37912-201ENSMUST00000191895 3076 ntBASIC17.55■□□□□ 0.4
Sf3a1Q8K4Z5 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sf3a1Q8K4Z5 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sf3a1Q8K4Z5 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sf3a1Q8K4Z5 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sf3a1Q8K4Z5 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Sf3a1Q8K4Z5 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC17.55■□□□□ 0.4
Sf3a1Q8K4Z5 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sf3a1Q8K4Z5 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sf3a1Q8K4Z5 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sf3a1Q8K4Z5 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC17.55■□□□□ 0.4
Sf3a1Q8K4Z5 Gm13517-201ENSMUST00000120782 1495 ntBASIC17.55■□□□□ 0.4
Sf3a1Q8K4Z5 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sf3a1Q8K4Z5 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sf3a1Q8K4Z5 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Sf3a1Q8K4Z5 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sf3a1Q8K4Z5 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Sf3a1Q8K4Z5 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sf3a1Q8K4Z5 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC17.54■□□□□ 0.4
Sf3a1Q8K4Z5 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sf3a1Q8K4Z5 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sf3a1Q8K4Z5 AC154767.3-201ENSMUST00000225150 1342 ntBASIC17.54■□□□□ 0.4
Sf3a1Q8K4Z5 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sf3a1Q8K4Z5 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sf3a1Q8K4Z5 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sf3a1Q8K4Z5 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Sf3a1Q8K4Z5 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sf3a1Q8K4Z5 Gm5566-201ENSMUST00000116118 459 ntBASIC17.54■□□□□ 0.4
Sf3a1Q8K4Z5 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Sf3a1Q8K4Z5 Gm22175-201ENSMUST00000175007 78 ntBASIC17.54■□□□□ 0.4
Sf3a1Q8K4Z5 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC17.54■□□□□ 0.4
Sf3a1Q8K4Z5 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Sf3a1Q8K4Z5 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Sf3a1Q8K4Z5 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sf3a1Q8K4Z5 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sf3a1Q8K4Z5 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Sf3a1Q8K4Z5 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sf3a1Q8K4Z5 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Sf3a1Q8K4Z5 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC17.54■□□□□ 0.4
Sf3a1Q8K4Z5 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sf3a1Q8K4Z5 Gm44981-201ENSMUST00000205549 1943 ntBASIC17.54■□□□□ 0.4
Sf3a1Q8K4Z5 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sf3a1Q8K4Z5 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
Sf3a1Q8K4Z5 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
Sf3a1Q8K4Z5 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Sf3a1Q8K4Z5 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sf3a1Q8K4Z5 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sf3a1Q8K4Z5 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sf3a1Q8K4Z5 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sf3a1Q8K4Z5 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sf3a1Q8K4Z5 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC17.53■□□□□ 0.4
Sf3a1Q8K4Z5 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Sf3a1Q8K4Z5 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Sf3a1Q8K4Z5 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Sf3a1Q8K4Z5 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC17.53■□□□□ 0.4
Sf3a1Q8K4Z5 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
Sf3a1Q8K4Z5 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
Sf3a1Q8K4Z5 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC17.53■□□□□ 0.4
Sf3a1Q8K4Z5 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Sf3a1Q8K4Z5 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sf3a1Q8K4Z5 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Sf3a1Q8K4Z5 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sf3a1Q8K4Z5 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC17.53■□□□□ 0.4
Sf3a1Q8K4Z5 Gm27430-201ENSMUST00000184585 107 ntBASIC17.53■□□□□ 0.4
Sf3a1Q8K4Z5 Gm28630-201ENSMUST00000187806 498 ntBASIC17.53■□□□□ 0.4
Sf3a1Q8K4Z5 Gm44333-201ENSMUST00000197168 107 ntBASIC17.53■□□□□ 0.4
Sf3a1Q8K4Z5 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sf3a1Q8K4Z5 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC17.53■□□□□ 0.4
Sf3a1Q8K4Z5 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC17.53■□□□□ 0.4
Sf3a1Q8K4Z5 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC17.53■□□□□ 0.4
Sf3a1Q8K4Z5 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
Sf3a1Q8K4Z5 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Sf3a1Q8K4Z5 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Sf3a1Q8K4Z5 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sf3a1Q8K4Z5 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms