Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clrn1Q8K445 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Clrn1Q8K445 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC13.54□□□□□ -0.24
Clrn1Q8K445 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.54□□□□□ -0.24
Clrn1Q8K445 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC13.54□□□□□ -0.24
Clrn1Q8K445 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Clrn1Q8K445 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clrn1Q8K445 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clrn1Q8K445 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC13.54□□□□□ -0.24
Clrn1Q8K445 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC13.54□□□□□ -0.24
Clrn1Q8K445 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Clrn1Q8K445 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC13.54□□□□□ -0.24
Clrn1Q8K445 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC13.54□□□□□ -0.24
Clrn1Q8K445 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC13.54□□□□□ -0.24
Clrn1Q8K445 Chchd1-203ENSMUST00000224633 557 ntBASIC13.54□□□□□ -0.24
Clrn1Q8K445 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Clrn1Q8K445 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Clrn1Q8K445 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clrn1Q8K445 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clrn1Q8K445 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clrn1Q8K445 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clrn1Q8K445 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clrn1Q8K445 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
Clrn1Q8K445 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Clrn1Q8K445 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clrn1Q8K445 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clrn1Q8K445 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Clrn1Q8K445 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Clrn1Q8K445 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.54□□□□□ -0.24
Clrn1Q8K445 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Clrn1Q8K445 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clrn1Q8K445 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clrn1Q8K445 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clrn1Q8K445 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clrn1Q8K445 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clrn1Q8K445 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC13.54□□□□□ -0.24
Clrn1Q8K445 CT025626.1-201ENSMUST00000223735 1455 ntBASIC13.54□□□□□ -0.24
Clrn1Q8K445 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clrn1Q8K445 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clrn1Q8K445 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clrn1Q8K445 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Clrn1Q8K445 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC13.54□□□□□ -0.24
Clrn1Q8K445 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Clrn1Q8K445 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clrn1Q8K445 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC13.53□□□□□ -0.24
Clrn1Q8K445 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clrn1Q8K445 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC13.53□□□□□ -0.24
Clrn1Q8K445 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clrn1Q8K445 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clrn1Q8K445 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clrn1Q8K445 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clrn1Q8K445 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clrn1Q8K445 Gm43697-201ENSMUST00000199637 2581 ntBASIC13.53□□□□□ -0.24
Clrn1Q8K445 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clrn1Q8K445 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC13.53□□□□□ -0.24
Clrn1Q8K445 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Clrn1Q8K445 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Clrn1Q8K445 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC13.53□□□□□ -0.24
Clrn1Q8K445 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC13.53□□□□□ -0.24
Clrn1Q8K445 Gm43575-201ENSMUST00000196420 516 ntBASIC13.53□□□□□ -0.24
Clrn1Q8K445 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC13.53□□□□□ -0.24
Clrn1Q8K445 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC13.53□□□□□ -0.24
Clrn1Q8K445 AC131710.1-201ENSMUST00000228336 990 ntBASIC13.53□□□□□ -0.24
Clrn1Q8K445 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clrn1Q8K445 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clrn1Q8K445 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clrn1Q8K445 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clrn1Q8K445 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clrn1Q8K445 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC13.53□□□□□ -0.24
Clrn1Q8K445 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC13.53□□□□□ -0.24
Clrn1Q8K445 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clrn1Q8K445 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clrn1Q8K445 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Clrn1Q8K445 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Clrn1Q8K445 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Clrn1Q8K445 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clrn1Q8K445 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Clrn1Q8K445 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clrn1Q8K445 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clrn1Q8K445 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Clrn1Q8K445 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Clrn1Q8K445 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Clrn1Q8K445 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Clrn1Q8K445 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Clrn1Q8K445 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Clrn1Q8K445 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Clrn1Q8K445 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Clrn1Q8K445 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clrn1Q8K445 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
Clrn1Q8K445 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clrn1Q8K445 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clrn1Q8K445 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC13.52□□□□□ -0.25
Clrn1Q8K445 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Clrn1Q8K445 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC13.52□□□□□ -0.25
Clrn1Q8K445 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC13.52□□□□□ -0.25
Clrn1Q8K445 Gm43474-201ENSMUST00000196415 774 ntBASIC13.52□□□□□ -0.25
Clrn1Q8K445 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Clrn1Q8K445 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clrn1Q8K445 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clrn1Q8K445 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 86.7 ms