Protein–RNA interactions for Protein: Q8K406

Lgi3, Leucine-rich repeat LGI family member 3, mousemouse

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lgi3Q8K406 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Lgi3Q8K406 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lgi3Q8K406 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lgi3Q8K406 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Lgi3Q8K406 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lgi3Q8K406 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lgi3Q8K406 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lgi3Q8K406 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lgi3Q8K406 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lgi3Q8K406 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lgi3Q8K406 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC12.33□□□□□ -0.44
Lgi3Q8K406 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lgi3Q8K406 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lgi3Q8K406 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC12.33□□□□□ -0.44
Lgi3Q8K406 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lgi3Q8K406 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lgi3Q8K406 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lgi3Q8K406 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC12.33□□□□□ -0.44
Lgi3Q8K406 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC12.33□□□□□ -0.44
Lgi3Q8K406 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Lgi3Q8K406 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Lgi3Q8K406 Mir7036b-201ENSMUST00000184791 63 ntBASIC12.33□□□□□ -0.44
Lgi3Q8K406 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC12.33□□□□□ -0.44
Lgi3Q8K406 AC155729.1-201ENSMUST00000227758 544 ntBASIC12.33□□□□□ -0.44
Lgi3Q8K406 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lgi3Q8K406 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lgi3Q8K406 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Lgi3Q8K406 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lgi3Q8K406 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lgi3Q8K406 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Lgi3Q8K406 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lgi3Q8K406 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lgi3Q8K406 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lgi3Q8K406 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lgi3Q8K406 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lgi3Q8K406 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Lgi3Q8K406 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lgi3Q8K406 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lgi3Q8K406 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lgi3Q8K406 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Lgi3Q8K406 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC12.33□□□□□ -0.44
Lgi3Q8K406 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Lgi3Q8K406 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lgi3Q8K406 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC12.33□□□□□ -0.44
Lgi3Q8K406 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lgi3Q8K406 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lgi3Q8K406 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Lgi3Q8K406 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lgi3Q8K406 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lgi3Q8K406 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC12.32□□□□□ -0.44
Lgi3Q8K406 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC12.32□□□□□ -0.44
Lgi3Q8K406 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lgi3Q8K406 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lgi3Q8K406 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Lgi3Q8K406 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Lgi3Q8K406 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Lgi3Q8K406 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Lgi3Q8K406 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Lgi3Q8K406 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Lgi3Q8K406 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lgi3Q8K406 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Lgi3Q8K406 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lgi3Q8K406 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lgi3Q8K406 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC12.32□□□□□ -0.44
Lgi3Q8K406 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC12.32□□□□□ -0.44
Lgi3Q8K406 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Lgi3Q8K406 Gm6944-201ENSMUST00000182449 1006 ntBASIC12.32□□□□□ -0.44
Lgi3Q8K406 Gm5177-201ENSMUST00000183092 997 ntBASIC12.32□□□□□ -0.44
Lgi3Q8K406 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC12.32□□□□□ -0.44
Lgi3Q8K406 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Lgi3Q8K406 Thap2-203ENSMUST00000218989 527 ntBASIC12.32□□□□□ -0.44
Lgi3Q8K406 AC154222.1-201ENSMUST00000223882 475 ntBASIC12.32□□□□□ -0.44
Lgi3Q8K406 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lgi3Q8K406 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Lgi3Q8K406 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Lgi3Q8K406 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lgi3Q8K406 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lgi3Q8K406 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC12.32□□□□□ -0.44
Lgi3Q8K406 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lgi3Q8K406 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lgi3Q8K406 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lgi3Q8K406 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Lgi3Q8K406 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lgi3Q8K406 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lgi3Q8K406 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lgi3Q8K406 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lgi3Q8K406 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Lgi3Q8K406 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lgi3Q8K406 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lgi3Q8K406 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Lgi3Q8K406 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lgi3Q8K406 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lgi3Q8K406 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lgi3Q8K406 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Lgi3Q8K406 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Lgi3Q8K406 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lgi3Q8K406 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Lgi3Q8K406 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Lgi3Q8K406 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC12.31□□□□□ -0.44
Lgi3Q8K406 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms