Protein–RNA interactions for Protein: Q8CHX7

Rftn2, Raftlin-2, mousemouse

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rftn2Q8CHX7 Ssr1-204ENSMUST00000225319 1610 ntBASIC15.19■□□□□ 0.02
Rftn2Q8CHX7 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rftn2Q8CHX7 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Rftn2Q8CHX7 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC15.19■□□□□ 0.02
Rftn2Q8CHX7 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC15.19■□□□□ 0.02
Rftn2Q8CHX7 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC15.19■□□□□ 0.02
Rftn2Q8CHX7 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rftn2Q8CHX7 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC15.19■□□□□ 0.02
Rftn2Q8CHX7 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC15.19■□□□□ 0.02
Rftn2Q8CHX7 Gm10766-202ENSMUST00000194123 606 ntBASIC15.19■□□□□ 0.02
Rftn2Q8CHX7 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rftn2Q8CHX7 AC165157.4-201ENSMUST00000220587 139 ntBASIC15.19■□□□□ 0.02
Rftn2Q8CHX7 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Rftn2Q8CHX7 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rftn2Q8CHX7 Gm16425-201ENSMUST00000118143 3130 ntBASIC15.19■□□□□ 0.02
Rftn2Q8CHX7 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rftn2Q8CHX7 Gm11960-202ENSMUST00000181063 2858 ntBASIC15.19■□□□□ 0.02
Rftn2Q8CHX7 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rftn2Q8CHX7 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rftn2Q8CHX7 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rftn2Q8CHX7 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rftn2Q8CHX7 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rftn2Q8CHX7 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC15.18■□□□□ 0.02
Rftn2Q8CHX7 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rftn2Q8CHX7 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rftn2Q8CHX7 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rftn2Q8CHX7 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rftn2Q8CHX7 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rftn2Q8CHX7 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rftn2Q8CHX7 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rftn2Q8CHX7 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rftn2Q8CHX7 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rftn2Q8CHX7 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Rftn2Q8CHX7 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC15.18■□□□□ 0.02
Rftn2Q8CHX7 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rftn2Q8CHX7 Gm6218-201ENSMUST00000219812 628 ntBASIC15.18■□□□□ 0.02
Rftn2Q8CHX7 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rftn2Q8CHX7 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rftn2Q8CHX7 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rftn2Q8CHX7 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rftn2Q8CHX7 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rftn2Q8CHX7 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rftn2Q8CHX7 Gm37728-201ENSMUST00000195025 2292 ntBASIC15.18■□□□□ 0.02
Rftn2Q8CHX7 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rftn2Q8CHX7 Gm9768-201ENSMUST00000206007 2861 ntBASIC15.18■□□□□ 0.02
Rftn2Q8CHX7 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rftn2Q8CHX7 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rftn2Q8CHX7 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rftn2Q8CHX7 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Rftn2Q8CHX7 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Rftn2Q8CHX7 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rftn2Q8CHX7 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rftn2Q8CHX7 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rftn2Q8CHX7 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rftn2Q8CHX7 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC15.17■□□□□ 0.02
Rftn2Q8CHX7 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rftn2Q8CHX7 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rftn2Q8CHX7 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC15.17■□□□□ 0.02
Rftn2Q8CHX7 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC15.17■□□□□ 0.02
Rftn2Q8CHX7 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC15.17■□□□□ 0.02
Rftn2Q8CHX7 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Rftn2Q8CHX7 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC15.17■□□□□ 0.02
Rftn2Q8CHX7 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC15.17■□□□□ 0.02
Rftn2Q8CHX7 Gm37714-201ENSMUST00000194742 342 ntBASIC15.17■□□□□ 0.02
Rftn2Q8CHX7 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC15.17■□□□□ 0.02
Rftn2Q8CHX7 AC131690.1-201ENSMUST00000218406 374 ntBASIC15.17■□□□□ 0.02
Rftn2Q8CHX7 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rftn2Q8CHX7 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rftn2Q8CHX7 Gm9797-201ENSMUST00000052902 613 ntBASIC15.17■□□□□ 0.02
Rftn2Q8CHX7 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Rftn2Q8CHX7 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC15.17■□□□□ 0.02
Rftn2Q8CHX7 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rftn2Q8CHX7 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rftn2Q8CHX7 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rftn2Q8CHX7 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rftn2Q8CHX7 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rftn2Q8CHX7 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Rftn2Q8CHX7 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rftn2Q8CHX7 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rftn2Q8CHX7 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rftn2Q8CHX7 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rftn2Q8CHX7 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rftn2Q8CHX7 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rftn2Q8CHX7 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rftn2Q8CHX7 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rftn2Q8CHX7 Gm12859-201ENSMUST00000117834 427 ntBASIC15.16■□□□□ 0.02
Rftn2Q8CHX7 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC15.16■□□□□ 0.02
Rftn2Q8CHX7 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rftn2Q8CHX7 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC15.16■□□□□ 0.02
Rftn2Q8CHX7 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Rftn2Q8CHX7 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC15.16■□□□□ 0.02
Rftn2Q8CHX7 Gtpbp10-211ENSMUST00000198799 648 ntBASIC15.16■□□□□ 0.02
Rftn2Q8CHX7 Gm18027-201ENSMUST00000218947 619 ntBASIC15.16■□□□□ 0.02
Rftn2Q8CHX7 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rftn2Q8CHX7 AC154846.1-201ENSMUST00000226278 862 ntBASIC15.16■□□□□ 0.02
Rftn2Q8CHX7 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Rftn2Q8CHX7 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rftn2Q8CHX7 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rftn2Q8CHX7 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rftn2Q8CHX7 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms