Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc28bQ8CEG5 Gm5639-201ENSMUST00000122305 2403 ntBASIC14.19□□□□□ -0.14
Ccdc28bQ8CEG5 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc28bQ8CEG5 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc28bQ8CEG5 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc28bQ8CEG5 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Ccdc28bQ8CEG5 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc28bQ8CEG5 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Ccdc28bQ8CEG5 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc28bQ8CEG5 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc28bQ8CEG5 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc28bQ8CEG5 Gm13464-201ENSMUST00000119418 935 ntBASIC14.18□□□□□ -0.14
Ccdc28bQ8CEG5 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC14.18□□□□□ -0.14
Ccdc28bQ8CEG5 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC14.18□□□□□ -0.14
Ccdc28bQ8CEG5 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc28bQ8CEG5 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc28bQ8CEG5 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC14.18□□□□□ -0.14
Ccdc28bQ8CEG5 AC159301.1-201ENSMUST00000225130 1182 ntBASIC14.18□□□□□ -0.14
Ccdc28bQ8CEG5 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc28bQ8CEG5 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc28bQ8CEG5 Gm27194-201ENSMUST00000175753 2936 ntBASIC14.18□□□□□ -0.14
Ccdc28bQ8CEG5 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc28bQ8CEG5 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Ccdc28bQ8CEG5 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc28bQ8CEG5 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc28bQ8CEG5 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc28bQ8CEG5 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc28bQ8CEG5 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc28bQ8CEG5 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc28bQ8CEG5 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc28bQ8CEG5 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc28bQ8CEG5 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc28bQ8CEG5 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc28bQ8CEG5 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc28bQ8CEG5 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc28bQ8CEG5 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc28bQ8CEG5 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc28bQ8CEG5 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc28bQ8CEG5 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
Ccdc28bQ8CEG5 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Ccdc28bQ8CEG5 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc28bQ8CEG5 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc28bQ8CEG5 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc28bQ8CEG5 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc28bQ8CEG5 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.17□□□□□ -0.14
Ccdc28bQ8CEG5 Gm14042-201ENSMUST00000120139 833 ntBASIC14.17□□□□□ -0.14
Ccdc28bQ8CEG5 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
Ccdc28bQ8CEG5 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc28bQ8CEG5 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC14.17□□□□□ -0.14
Ccdc28bQ8CEG5 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc28bQ8CEG5 Gm6089-201ENSMUST00000197666 938 ntBASIC14.17□□□□□ -0.14
Ccdc28bQ8CEG5 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.17□□□□□ -0.14
Ccdc28bQ8CEG5 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc28bQ8CEG5 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc28bQ8CEG5 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Ccdc28bQ8CEG5 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc28bQ8CEG5 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Ccdc28bQ8CEG5 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc28bQ8CEG5 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
Ccdc28bQ8CEG5 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc28bQ8CEG5 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Ccdc28bQ8CEG5 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc28bQ8CEG5 Gm37861-201ENSMUST00000193534 2869 ntBASIC14.16□□□□□ -0.14
Ccdc28bQ8CEG5 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc28bQ8CEG5 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Ccdc28bQ8CEG5 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Ccdc28bQ8CEG5 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc28bQ8CEG5 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc28bQ8CEG5 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc28bQ8CEG5 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc28bQ8CEG5 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc28bQ8CEG5 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc28bQ8CEG5 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc28bQ8CEG5 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Ccdc28bQ8CEG5 Gm13418-201ENSMUST00000119097 944 ntBASIC14.16□□□□□ -0.14
Ccdc28bQ8CEG5 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc28bQ8CEG5 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Ccdc28bQ8CEG5 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc28bQ8CEG5 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC14.16□□□□□ -0.14
Ccdc28bQ8CEG5 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC14.16□□□□□ -0.14
Ccdc28bQ8CEG5 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc28bQ8CEG5 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc28bQ8CEG5 Gm7787-201ENSMUST00000216858 688 ntBASIC14.16□□□□□ -0.14
Ccdc28bQ8CEG5 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Ccdc28bQ8CEG5 AC147366.1-201ENSMUST00000227671 852 ntBASIC14.16□□□□□ -0.14
Ccdc28bQ8CEG5 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc28bQ8CEG5 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc28bQ8CEG5 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc28bQ8CEG5 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc28bQ8CEG5 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc28bQ8CEG5 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc28bQ8CEG5 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc28bQ8CEG5 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Ccdc28bQ8CEG5 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc28bQ8CEG5 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC14.16□□□□□ -0.14
Ccdc28bQ8CEG5 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc28bQ8CEG5 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC14.16□□□□□ -0.14
Ccdc28bQ8CEG5 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc28bQ8CEG5 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Ccdc28bQ8CEG5 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms