Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
Nup88Q8CEC0 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC16.94■□□□□ 0.3
Nup88Q8CEC0 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Nup88Q8CEC0 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Nup88Q8CEC0 Gm10253-201ENSMUST00000194270 940 ntBASIC16.94■□□□□ 0.3
Nup88Q8CEC0 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nup88Q8CEC0 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nup88Q8CEC0 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Nup88Q8CEC0 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nup88Q8CEC0 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nup88Q8CEC0 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nup88Q8CEC0 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nup88Q8CEC0 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Nup88Q8CEC0 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC16.94■□□□□ 0.3
Nup88Q8CEC0 Gm6018-201ENSMUST00000216090 1306 ntBASIC16.94■□□□□ 0.3
Nup88Q8CEC0 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nup88Q8CEC0 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nup88Q8CEC0 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nup88Q8CEC0 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Nup88Q8CEC0 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nup88Q8CEC0 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Nup88Q8CEC0 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Nup88Q8CEC0 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nup88Q8CEC0 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nup88Q8CEC0 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Nup88Q8CEC0 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nup88Q8CEC0 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nup88Q8CEC0 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC16.93■□□□□ 0.3
Nup88Q8CEC0 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nup88Q8CEC0 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nup88Q8CEC0 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
Nup88Q8CEC0 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Nup88Q8CEC0 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Nup88Q8CEC0 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Nup88Q8CEC0 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC16.93■□□□□ 0.3
Nup88Q8CEC0 Gm22175-201ENSMUST00000175007 78 ntBASIC16.93■□□□□ 0.3
Nup88Q8CEC0 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nup88Q8CEC0 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Nup88Q8CEC0 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC16.93■□□□□ 0.3
Nup88Q8CEC0 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nup88Q8CEC0 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Nup88Q8CEC0 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nup88Q8CEC0 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Nup88Q8CEC0 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nup88Q8CEC0 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nup88Q8CEC0 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Nup88Q8CEC0 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nup88Q8CEC0 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nup88Q8CEC0 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Nup88Q8CEC0 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nup88Q8CEC0 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Nup88Q8CEC0 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nup88Q8CEC0 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nup88Q8CEC0 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
Nup88Q8CEC0 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Nup88Q8CEC0 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nup88Q8CEC0 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nup88Q8CEC0 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nup88Q8CEC0 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Nup88Q8CEC0 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nup88Q8CEC0 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nup88Q8CEC0 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nup88Q8CEC0 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Nup88Q8CEC0 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Nup88Q8CEC0 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC16.92■□□□□ 0.3
Nup88Q8CEC0 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nup88Q8CEC0 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC16.92■□□□□ 0.3
Nup88Q8CEC0 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Nup88Q8CEC0 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC16.92■□□□□ 0.3
Nup88Q8CEC0 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Nup88Q8CEC0 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nup88Q8CEC0 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Nup88Q8CEC0 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nup88Q8CEC0 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Nup88Q8CEC0 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Nup88Q8CEC0 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nup88Q8CEC0 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC16.92■□□□□ 0.3
Nup88Q8CEC0 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nup88Q8CEC0 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nup88Q8CEC0 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nup88Q8CEC0 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Nup88Q8CEC0 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nup88Q8CEC0 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC16.92■□□□□ 0.3
Nup88Q8CEC0 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nup88Q8CEC0 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nup88Q8CEC0 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nup88Q8CEC0 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
Nup88Q8CEC0 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC16.91■□□□□ 0.3
Nup88Q8CEC0 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nup88Q8CEC0 Gm7336-201ENSMUST00000107041 1232 ntBASIC16.91■□□□□ 0.3
Nup88Q8CEC0 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Nup88Q8CEC0 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Nup88Q8CEC0 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Nup88Q8CEC0 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nup88Q8CEC0 Gm7774-201ENSMUST00000200064 533 ntBASIC16.91■□□□□ 0.3
Nup88Q8CEC0 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC16.91■□□□□ 0.3
Nup88Q8CEC0 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC16.91■□□□□ 0.3
Nup88Q8CEC0 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Nup88Q8CEC0 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nup88Q8CEC0 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms