Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Vcpip1Q8CDG3 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC15.43■□□□□ 0.06
Vcpip1Q8CDG3 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
Vcpip1Q8CDG3 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC15.42■□□□□ 0.06
Vcpip1Q8CDG3 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Vcpip1Q8CDG3 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Vcpip1Q8CDG3 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC15.42■□□□□ 0.06
Vcpip1Q8CDG3 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Vcpip1Q8CDG3 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Vcpip1Q8CDG3 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Vcpip1Q8CDG3 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC15.42■□□□□ 0.06
Vcpip1Q8CDG3 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Vcpip1Q8CDG3 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
Vcpip1Q8CDG3 Gm9385-201ENSMUST00000117563 472 ntBASIC15.42■□□□□ 0.06
Vcpip1Q8CDG3 Gm15920-201ENSMUST00000118998 402 ntBASIC15.42■□□□□ 0.06
Vcpip1Q8CDG3 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Vcpip1Q8CDG3 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
Vcpip1Q8CDG3 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Vcpip1Q8CDG3 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC15.42■□□□□ 0.06
Vcpip1Q8CDG3 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Vcpip1Q8CDG3 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC15.42■□□□□ 0.06
Vcpip1Q8CDG3 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Vcpip1Q8CDG3 Gm37691-201ENSMUST00000192147 2573 ntBASIC15.42■□□□□ 0.06
Vcpip1Q8CDG3 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Vcpip1Q8CDG3 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Vcpip1Q8CDG3 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Vcpip1Q8CDG3 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Vcpip1Q8CDG3 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Vcpip1Q8CDG3 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vcpip1Q8CDG3 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
Vcpip1Q8CDG3 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vcpip1Q8CDG3 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Vcpip1Q8CDG3 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vcpip1Q8CDG3 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vcpip1Q8CDG3 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC15.41■□□□□ 0.06
Vcpip1Q8CDG3 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vcpip1Q8CDG3 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Vcpip1Q8CDG3 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vcpip1Q8CDG3 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vcpip1Q8CDG3 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vcpip1Q8CDG3 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Vcpip1Q8CDG3 Gm14042-201ENSMUST00000120139 833 ntBASIC15.41■□□□□ 0.06
Vcpip1Q8CDG3 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
Vcpip1Q8CDG3 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
Vcpip1Q8CDG3 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Vcpip1Q8CDG3 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
Vcpip1Q8CDG3 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC15.41■□□□□ 0.06
Vcpip1Q8CDG3 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC15.41■□□□□ 0.06
Vcpip1Q8CDG3 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vcpip1Q8CDG3 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vcpip1Q8CDG3 Gm10175-201ENSMUST00000086013 645 ntBASIC15.41■□□□□ 0.06
Vcpip1Q8CDG3 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Vcpip1Q8CDG3 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vcpip1Q8CDG3 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vcpip1Q8CDG3 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Vcpip1Q8CDG3 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Vcpip1Q8CDG3 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vcpip1Q8CDG3 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Vcpip1Q8CDG3 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Vcpip1Q8CDG3 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vcpip1Q8CDG3 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vcpip1Q8CDG3 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Vcpip1Q8CDG3 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vcpip1Q8CDG3 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Vcpip1Q8CDG3 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vcpip1Q8CDG3 CT030684.3-201ENSMUST00000227308 2445 ntBASIC15.41■□□□□ 0.06
Vcpip1Q8CDG3 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vcpip1Q8CDG3 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vcpip1Q8CDG3 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC15.4■□□□□ 0.06
Vcpip1Q8CDG3 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vcpip1Q8CDG3 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
Vcpip1Q8CDG3 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vcpip1Q8CDG3 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vcpip1Q8CDG3 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vcpip1Q8CDG3 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Vcpip1Q8CDG3 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Vcpip1Q8CDG3 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vcpip1Q8CDG3 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
Vcpip1Q8CDG3 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
Vcpip1Q8CDG3 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC15.4■□□□□ 0.06
Vcpip1Q8CDG3 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vcpip1Q8CDG3 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC15.4■□□□□ 0.06
Vcpip1Q8CDG3 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Vcpip1Q8CDG3 Mir3113-201ENSMUST00000175478 76 ntBASIC15.4■□□□□ 0.06
Vcpip1Q8CDG3 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vcpip1Q8CDG3 Gm9182-201ENSMUST00000217829 639 ntBASIC15.4■□□□□ 0.06
Vcpip1Q8CDG3 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vcpip1Q8CDG3 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vcpip1Q8CDG3 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC15.4■□□□□ 0.06
Vcpip1Q8CDG3 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vcpip1Q8CDG3 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vcpip1Q8CDG3 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
Vcpip1Q8CDG3 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vcpip1Q8CDG3 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC15.4■□□□□ 0.06
Vcpip1Q8CDG3 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Vcpip1Q8CDG3 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vcpip1Q8CDG3 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vcpip1Q8CDG3 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vcpip1Q8CDG3 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vcpip1Q8CDG3 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms