Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Lrif1Q8CDD9 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lrif1Q8CDD9 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lrif1Q8CDD9 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lrif1Q8CDD9 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lrif1Q8CDD9 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lrif1Q8CDD9 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC14.2□□□□□ -0.14
Lrif1Q8CDD9 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.2□□□□□ -0.14
Lrif1Q8CDD9 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lrif1Q8CDD9 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lrif1Q8CDD9 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lrif1Q8CDD9 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lrif1Q8CDD9 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lrif1Q8CDD9 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lrif1Q8CDD9 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Lrif1Q8CDD9 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lrif1Q8CDD9 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lrif1Q8CDD9 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lrif1Q8CDD9 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lrif1Q8CDD9 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lrif1Q8CDD9 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Lrif1Q8CDD9 Gm18244-201ENSMUST00000219747 1566 ntBASIC14.19□□□□□ -0.14
Lrif1Q8CDD9 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lrif1Q8CDD9 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Lrif1Q8CDD9 Gm11453-201ENSMUST00000117318 1007 ntBASIC14.19□□□□□ -0.14
Lrif1Q8CDD9 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lrif1Q8CDD9 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC14.19□□□□□ -0.14
Lrif1Q8CDD9 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Lrif1Q8CDD9 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Lrif1Q8CDD9 Gm7787-201ENSMUST00000216858 688 ntBASIC14.19□□□□□ -0.14
Lrif1Q8CDD9 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lrif1Q8CDD9 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC14.19□□□□□ -0.14
Lrif1Q8CDD9 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lrif1Q8CDD9 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lrif1Q8CDD9 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lrif1Q8CDD9 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Lrif1Q8CDD9 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lrif1Q8CDD9 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Lrif1Q8CDD9 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lrif1Q8CDD9 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Lrif1Q8CDD9 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lrif1Q8CDD9 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Lrif1Q8CDD9 Gm45630-201ENSMUST00000210243 1911 ntBASIC14.19□□□□□ -0.14
Lrif1Q8CDD9 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
Lrif1Q8CDD9 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Lrif1Q8CDD9 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lrif1Q8CDD9 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lrif1Q8CDD9 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC14.19□□□□□ -0.14
Lrif1Q8CDD9 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lrif1Q8CDD9 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lrif1Q8CDD9 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Lrif1Q8CDD9 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lrif1Q8CDD9 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC14.18□□□□□ -0.14
Lrif1Q8CDD9 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Lrif1Q8CDD9 Gm37411-201ENSMUST00000194180 2282 ntBASIC14.18□□□□□ -0.14
Lrif1Q8CDD9 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lrif1Q8CDD9 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Lrif1Q8CDD9 Gm11873-201ENSMUST00000117877 1304 ntBASIC14.18□□□□□ -0.14
Lrif1Q8CDD9 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lrif1Q8CDD9 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Lrif1Q8CDD9 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lrif1Q8CDD9 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lrif1Q8CDD9 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lrif1Q8CDD9 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lrif1Q8CDD9 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lrif1Q8CDD9 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lrif1Q8CDD9 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lrif1Q8CDD9 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.18□□□□□ -0.14
Lrif1Q8CDD9 Gm11779-201ENSMUST00000118541 368 ntBASIC14.18□□□□□ -0.14
Lrif1Q8CDD9 Gm18489-201ENSMUST00000172565 551 ntBASIC14.18□□□□□ -0.14
Lrif1Q8CDD9 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC14.18□□□□□ -0.14
Lrif1Q8CDD9 Gm5264-201ENSMUST00000190584 848 ntBASIC14.18□□□□□ -0.14
Lrif1Q8CDD9 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC14.18□□□□□ -0.14
Lrif1Q8CDD9 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC14.18□□□□□ -0.14
Lrif1Q8CDD9 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lrif1Q8CDD9 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lrif1Q8CDD9 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lrif1Q8CDD9 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Lrif1Q8CDD9 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lrif1Q8CDD9 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Lrif1Q8CDD9 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lrif1Q8CDD9 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Lrif1Q8CDD9 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Lrif1Q8CDD9 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lrif1Q8CDD9 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lrif1Q8CDD9 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Lrif1Q8CDD9 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lrif1Q8CDD9 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Lrif1Q8CDD9 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lrif1Q8CDD9 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Lrif1Q8CDD9 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lrif1Q8CDD9 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
Lrif1Q8CDD9 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lrif1Q8CDD9 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lrif1Q8CDD9 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Lrif1Q8CDD9 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC14.17□□□□□ -0.14
Lrif1Q8CDD9 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lrif1Q8CDD9 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC14.17□□□□□ -0.14
Lrif1Q8CDD9 Gm12260-201ENSMUST00000122447 411 ntBASIC14.17□□□□□ -0.14
Lrif1Q8CDD9 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms