Protein–RNA interactions for Protein: Q8CCS6

Pabpn1, Polyadenylate-binding protein 2, mousemouse

Known RBP Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1Q8CCS6 Gm16397-201ENSMUST00000122201 494 ntBASIC21.75■■□□□ 1.07
Pabpn1Q8CCS6 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Pabpn1Q8CCS6 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Pabpn1Q8CCS6 Mir497b-201ENSMUST00000093601 125 ntBASIC21.75■■□□□ 1.07
Pabpn1Q8CCS6 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pabpn1Q8CCS6 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Pabpn1Q8CCS6 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pabpn1Q8CCS6 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pabpn1Q8CCS6 Gm15544-201ENSMUST00000118776 1531 ntBASIC21.75■■□□□ 1.07
Pabpn1Q8CCS6 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Pabpn1Q8CCS6 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC21.74■■□□□ 1.07
Pabpn1Q8CCS6 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pabpn1Q8CCS6 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC21.74■■□□□ 1.07
Pabpn1Q8CCS6 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pabpn1Q8CCS6 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pabpn1Q8CCS6 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pabpn1Q8CCS6 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
Pabpn1Q8CCS6 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC21.74■■□□□ 1.07
Pabpn1Q8CCS6 AA914427-201ENSMUST00000193194 1166 ntBASIC21.74■■□□□ 1.07
Pabpn1Q8CCS6 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Pabpn1Q8CCS6 AC022775.2-201ENSMUST00000227885 646 ntBASIC21.74■■□□□ 1.07
Pabpn1Q8CCS6 Gm43072-201ENSMUST00000200283 1671 ntBASIC21.74■■□□□ 1.07
Pabpn1Q8CCS6 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pabpn1Q8CCS6 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pabpn1Q8CCS6 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Pabpn1Q8CCS6 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pabpn1Q8CCS6 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pabpn1Q8CCS6 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pabpn1Q8CCS6 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Pabpn1Q8CCS6 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pabpn1Q8CCS6 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pabpn1Q8CCS6 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pabpn1Q8CCS6 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC21.73■■□□□ 1.07
Pabpn1Q8CCS6 Mir6958-201ENSMUST00000184207 73 ntBASIC21.73■■□□□ 1.07
Pabpn1Q8CCS6 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC21.73■■□□□ 1.07
Pabpn1Q8CCS6 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC21.73■■□□□ 1.07
Pabpn1Q8CCS6 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pabpn1Q8CCS6 Rn7sk-201ENSMUST00000083103 331 ntBASIC21.73■■□□□ 1.07
Pabpn1Q8CCS6 Gm26315-201ENSMUST00000083890 321 ntBASIC21.73■■□□□ 1.07
Pabpn1Q8CCS6 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Pabpn1Q8CCS6 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Pabpn1Q8CCS6 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pabpn1Q8CCS6 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Pabpn1Q8CCS6 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pabpn1Q8CCS6 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pabpn1Q8CCS6 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC21.73■■□□□ 1.07
Pabpn1Q8CCS6 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pabpn1Q8CCS6 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Pabpn1Q8CCS6 Gm43081-201ENSMUST00000199082 1380 ntBASIC21.73■■□□□ 1.07
Pabpn1Q8CCS6 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Pabpn1Q8CCS6 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pabpn1Q8CCS6 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pabpn1Q8CCS6 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pabpn1Q8CCS6 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC21.72■■□□□ 1.07
Pabpn1Q8CCS6 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Pabpn1Q8CCS6 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC21.72■■□□□ 1.07
Pabpn1Q8CCS6 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC21.72■■□□□ 1.07
Pabpn1Q8CCS6 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC21.72■■□□□ 1.07
Pabpn1Q8CCS6 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pabpn1Q8CCS6 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC21.72■■□□□ 1.07
Pabpn1Q8CCS6 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pabpn1Q8CCS6 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC21.72■■□□□ 1.07
Pabpn1Q8CCS6 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Pabpn1Q8CCS6 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pabpn1Q8CCS6 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pabpn1Q8CCS6 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pabpn1Q8CCS6 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Pabpn1Q8CCS6 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pabpn1Q8CCS6 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC21.71■■□□□ 1.07
Pabpn1Q8CCS6 Gm13123-201ENSMUST00000122173 492 ntBASIC21.71■■□□□ 1.07
Pabpn1Q8CCS6 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pabpn1Q8CCS6 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Pabpn1Q8CCS6 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Pabpn1Q8CCS6 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Pabpn1Q8CCS6 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC21.71■■□□□ 1.07
Pabpn1Q8CCS6 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pabpn1Q8CCS6 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pabpn1Q8CCS6 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pabpn1Q8CCS6 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Pabpn1Q8CCS6 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Pabpn1Q8CCS6 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Pabpn1Q8CCS6 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pabpn1Q8CCS6 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pabpn1Q8CCS6 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pabpn1Q8CCS6 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pabpn1Q8CCS6 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Pabpn1Q8CCS6 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC21.7■■□□□ 1.06
Pabpn1Q8CCS6 Gm26956-201ENSMUST00000182176 986 ntBASIC21.7■■□□□ 1.06
Pabpn1Q8CCS6 AC124457.1-201ENSMUST00000198845 120 ntBASIC21.7■■□□□ 1.06
Pabpn1Q8CCS6 Gm44126-201ENSMUST00000204831 514 ntBASIC21.7■■□□□ 1.06
Pabpn1Q8CCS6 Gm5781-201ENSMUST00000219792 443 ntBASIC21.7■■□□□ 1.06
Pabpn1Q8CCS6 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pabpn1Q8CCS6 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pabpn1Q8CCS6 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pabpn1Q8CCS6 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC21.7■■□□□ 1.06
Pabpn1Q8CCS6 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pabpn1Q8CCS6 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC21.7■■□□□ 1.06
Pabpn1Q8CCS6 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Pabpn1Q8CCS6 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pabpn1Q8CCS6 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms