Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 AC124732.2-201ENSMUST00000221977 316 ntBASIC18.3■□□□□ 0.52
Ccdc60Q8C4J0 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ccdc60Q8C4J0 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ccdc60Q8C4J0 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ccdc60Q8C4J0 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ccdc60Q8C4J0 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ccdc60Q8C4J0 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC18.3■□□□□ 0.52
Ccdc60Q8C4J0 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ccdc60Q8C4J0 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ccdc60Q8C4J0 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC18.3■□□□□ 0.52
Ccdc60Q8C4J0 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc60Q8C4J0 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc60Q8C4J0 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc60Q8C4J0 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc60Q8C4J0 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc60Q8C4J0 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC18.29■□□□□ 0.52
Ccdc60Q8C4J0 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc60Q8C4J0 Gm27430-201ENSMUST00000184585 107 ntBASIC18.29■□□□□ 0.52
Ccdc60Q8C4J0 Gm44333-201ENSMUST00000197168 107 ntBASIC18.29■□□□□ 0.52
Ccdc60Q8C4J0 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC18.29■□□□□ 0.52
Ccdc60Q8C4J0 Gm45453-201ENSMUST00000211758 853 ntBASIC18.29■□□□□ 0.52
Ccdc60Q8C4J0 AC121598.1-201ENSMUST00000228224 1019 ntBASIC18.29■□□□□ 0.52
Ccdc60Q8C4J0 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc60Q8C4J0 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc60Q8C4J0 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc60Q8C4J0 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc60Q8C4J0 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc60Q8C4J0 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc60Q8C4J0 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc60Q8C4J0 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccdc60Q8C4J0 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ccdc60Q8C4J0 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccdc60Q8C4J0 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccdc60Q8C4J0 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccdc60Q8C4J0 Gm43205-201ENSMUST00000198622 1968 ntBASIC18.28■□□□□ 0.52
Ccdc60Q8C4J0 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccdc60Q8C4J0 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Ccdc60Q8C4J0 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccdc60Q8C4J0 Rbfox2-208ENSMUST00000227930 1218 ntBASIC18.28■□□□□ 0.52
Ccdc60Q8C4J0 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ccdc60Q8C4J0 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccdc60Q8C4J0 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
Ccdc60Q8C4J0 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC18.28■□□□□ 0.52
Ccdc60Q8C4J0 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC18.28■□□□□ 0.52
Ccdc60Q8C4J0 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccdc60Q8C4J0 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC18.28■□□□□ 0.52
Ccdc60Q8C4J0 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC18.28■□□□□ 0.52
Ccdc60Q8C4J0 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ccdc60Q8C4J0 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccdc60Q8C4J0 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
Ccdc60Q8C4J0 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ccdc60Q8C4J0 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ccdc60Q8C4J0 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ccdc60Q8C4J0 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ccdc60Q8C4J0 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ccdc60Q8C4J0 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Ccdc60Q8C4J0 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Ccdc60Q8C4J0 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Ccdc60Q8C4J0 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Ccdc60Q8C4J0 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC18.27■□□□□ 0.52
Ccdc60Q8C4J0 AC090659.2-201ENSMUST00000225378 1186 ntBASIC18.27■□□□□ 0.52
Ccdc60Q8C4J0 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ccdc60Q8C4J0 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Ccdc60Q8C4J0 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Ccdc60Q8C4J0 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ccdc60Q8C4J0 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ccdc60Q8C4J0 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
Ccdc60Q8C4J0 Gm37411-201ENSMUST00000194180 2282 ntBASIC18.26■□□□□ 0.51
Ccdc60Q8C4J0 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc60Q8C4J0 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc60Q8C4J0 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc60Q8C4J0 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc60Q8C4J0 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC18.26■□□□□ 0.51
Ccdc60Q8C4J0 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Ccdc60Q8C4J0 Gm12882-201ENSMUST00000121696 517 ntBASIC18.26■□□□□ 0.51
Ccdc60Q8C4J0 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc60Q8C4J0 Gm27618-201ENSMUST00000183671 60 ntBASIC18.26■□□□□ 0.51
Ccdc60Q8C4J0 Gm27622-201ENSMUST00000183779 60 ntBASIC18.26■□□□□ 0.51
Ccdc60Q8C4J0 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC18.26■□□□□ 0.51
Ccdc60Q8C4J0 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC18.26■□□□□ 0.51
Ccdc60Q8C4J0 BC001981-202ENSMUST00000191393 1545 ntBASIC18.26■□□□□ 0.51
Ccdc60Q8C4J0 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc60Q8C4J0 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Ccdc60Q8C4J0 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc60Q8C4J0 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc60Q8C4J0 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc60Q8C4J0 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc60Q8C4J0 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc60Q8C4J0 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc60Q8C4J0 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Ccdc60Q8C4J0 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc60Q8C4J0 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc60Q8C4J0 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc60Q8C4J0 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc60Q8C4J0 Mmp14-206ENSMUST00000225641 3238 ntBASIC18.25■□□□□ 0.51
Ccdc60Q8C4J0 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc60Q8C4J0 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc60Q8C4J0 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc60Q8C4J0 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Ccdc60Q8C4J0 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms