Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chd9Q8BYH8 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Chd9Q8BYH8 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chd9Q8BYH8 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chd9Q8BYH8 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chd9Q8BYH8 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Chd9Q8BYH8 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chd9Q8BYH8 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Chd9Q8BYH8 Gm1335-201ENSMUST00000121653 386 ntBASIC11.16□□□□□ -0.62
Chd9Q8BYH8 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC11.16□□□□□ -0.62
Chd9Q8BYH8 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Chd9Q8BYH8 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chd9Q8BYH8 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC11.16□□□□□ -0.62
Chd9Q8BYH8 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chd9Q8BYH8 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chd9Q8BYH8 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chd9Q8BYH8 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Chd9Q8BYH8 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC11.16□□□□□ -0.62
Chd9Q8BYH8 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Chd9Q8BYH8 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Chd9Q8BYH8 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chd9Q8BYH8 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chd9Q8BYH8 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chd9Q8BYH8 Gm42632-201ENSMUST00000201707 2411 ntBASIC11.15□□□□□ -0.62
Chd9Q8BYH8 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chd9Q8BYH8 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chd9Q8BYH8 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chd9Q8BYH8 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chd9Q8BYH8 Gm2606-201ENSMUST00000100754 1002 ntBASIC11.15□□□□□ -0.62
Chd9Q8BYH8 Gm12537-201ENSMUST00000119266 1002 ntBASIC11.15□□□□□ -0.62
Chd9Q8BYH8 Gm12070-201ENSMUST00000119551 1002 ntBASIC11.15□□□□□ -0.62
Chd9Q8BYH8 Gm12671-201ENSMUST00000119978 1002 ntBASIC11.15□□□□□ -0.62
Chd9Q8BYH8 Gm13292-201ENSMUST00000120014 1000 ntBASIC11.15□□□□□ -0.62
Chd9Q8BYH8 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Chd9Q8BYH8 Gm10359-201ENSMUST00000180167 1002 ntBASIC11.15□□□□□ -0.62
Chd9Q8BYH8 Gm12033-201ENSMUST00000180654 1002 ntBASIC11.15□□□□□ -0.62
Chd9Q8BYH8 Gm5559-201ENSMUST00000180755 1002 ntBASIC11.15□□□□□ -0.62
Chd9Q8BYH8 Gm6621-201ENSMUST00000193251 772 ntBASIC11.15□□□□□ -0.62
Chd9Q8BYH8 Gm7293-201ENSMUST00000216682 1007 ntBASIC11.15□□□□□ -0.62
Chd9Q8BYH8 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chd9Q8BYH8 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Chd9Q8BYH8 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Chd9Q8BYH8 Ccdc166-201ENSMUST00000182172 2584 ntBASIC11.15□□□□□ -0.62
Chd9Q8BYH8 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chd9Q8BYH8 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Chd9Q8BYH8 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Chd9Q8BYH8 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chd9Q8BYH8 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chd9Q8BYH8 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chd9Q8BYH8 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Chd9Q8BYH8 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC11.15□□□□□ -0.62
Chd9Q8BYH8 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chd9Q8BYH8 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Chd9Q8BYH8 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chd9Q8BYH8 Gm14665-201ENSMUST00000122294 557 ntBASIC11.15□□□□□ -0.62
Chd9Q8BYH8 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Chd9Q8BYH8 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Chd9Q8BYH8 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chd9Q8BYH8 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Chd9Q8BYH8 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC11.15□□□□□ -0.62
Chd9Q8BYH8 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chd9Q8BYH8 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chd9Q8BYH8 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Chd9Q8BYH8 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chd9Q8BYH8 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Chd9Q8BYH8 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chd9Q8BYH8 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chd9Q8BYH8 Sybu-209ENSMUST00000228639 4113 ntBASIC11.15□□□□□ -0.63
Chd9Q8BYH8 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC11.15□□□□□ -0.63
Chd9Q8BYH8 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Chd9Q8BYH8 Gm24255-201ENSMUST00000104481 128 ntBASIC11.14□□□□□ -0.63
Chd9Q8BYH8 Gm13786-201ENSMUST00000122371 333 ntBASIC11.14□□□□□ -0.63
Chd9Q8BYH8 Gm27023-201ENSMUST00000182372 285 ntBASIC11.14□□□□□ -0.63
Chd9Q8BYH8 Gm4607-201ENSMUST00000206649 577 ntBASIC11.14□□□□□ -0.63
Chd9Q8BYH8 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC11.14□□□□□ -0.63
Chd9Q8BYH8 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC11.14□□□□□ -0.63
Chd9Q8BYH8 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chd9Q8BYH8 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chd9Q8BYH8 Tfap2a-203ENSMUST00000223869 2037 ntBASIC11.14□□□□□ -0.63
Chd9Q8BYH8 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Chd9Q8BYH8 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Chd9Q8BYH8 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chd9Q8BYH8 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chd9Q8BYH8 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC11.14□□□□□ -0.63
Chd9Q8BYH8 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chd9Q8BYH8 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chd9Q8BYH8 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chd9Q8BYH8 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC11.14□□□□□ -0.63
Chd9Q8BYH8 Gm25732-201ENSMUST00000175168 60 ntBASIC11.14□□□□□ -0.63
Chd9Q8BYH8 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC11.14□□□□□ -0.63
Chd9Q8BYH8 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chd9Q8BYH8 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Chd9Q8BYH8 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC11.14□□□□□ -0.63
Chd9Q8BYH8 Snora73a-201ENSMUST00000082453 205 ntBASIC11.14□□□□□ -0.63
Chd9Q8BYH8 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chd9Q8BYH8 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC11.14□□□□□ -0.63
Chd9Q8BYH8 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chd9Q8BYH8 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chd9Q8BYH8 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC11.14□□□□□ -0.63
Chd9Q8BYH8 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms