Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
Usp54Q8BL06 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Usp54Q8BL06 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Usp54Q8BL06 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Usp54Q8BL06 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC20.03■□□□□ 0.8
Usp54Q8BL06 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC20.03■□□□□ 0.8
Usp54Q8BL06 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Usp54Q8BL06 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Usp54Q8BL06 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Usp54Q8BL06 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Usp54Q8BL06 Gm24447-201ENSMUST00000083977 338 ntBASIC20.03■□□□□ 0.8
Usp54Q8BL06 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Usp54Q8BL06 Gm10339-203ENSMUST00000225409 1671 ntBASIC20.03■□□□□ 0.8
Usp54Q8BL06 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Usp54Q8BL06 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Usp54Q8BL06 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Usp54Q8BL06 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Usp54Q8BL06 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Usp54Q8BL06 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Usp54Q8BL06 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC20.02■□□□□ 0.8
Usp54Q8BL06 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Usp54Q8BL06 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Usp54Q8BL06 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Usp54Q8BL06 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Usp54Q8BL06 Gm15770-201ENSMUST00000117498 584 ntBASIC20.02■□□□□ 0.8
Usp54Q8BL06 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC20.02■□□□□ 0.8
Usp54Q8BL06 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Usp54Q8BL06 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC20.02■□□□□ 0.8
Usp54Q8BL06 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Usp54Q8BL06 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC20.02■□□□□ 0.8
Usp54Q8BL06 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Usp54Q8BL06 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Usp54Q8BL06 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Usp54Q8BL06 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
Usp54Q8BL06 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Usp54Q8BL06 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Usp54Q8BL06 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Usp54Q8BL06 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Usp54Q8BL06 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC20.01■□□□□ 0.79
Usp54Q8BL06 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Usp54Q8BL06 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Usp54Q8BL06 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Usp54Q8BL06 Gm12384-201ENSMUST00000119228 919 ntBASIC20.01■□□□□ 0.79
Usp54Q8BL06 Gm2639-201ENSMUST00000156881 1297 ntBASIC20.01■□□□□ 0.79
Usp54Q8BL06 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Usp54Q8BL06 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC20.01■□□□□ 0.79
Usp54Q8BL06 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC20.01■□□□□ 0.79
Usp54Q8BL06 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Usp54Q8BL06 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Usp54Q8BL06 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Usp54Q8BL06 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Usp54Q8BL06 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Usp54Q8BL06 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Usp54Q8BL06 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Usp54Q8BL06 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Usp54Q8BL06 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Usp54Q8BL06 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Usp54Q8BL06 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Usp54Q8BL06 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Usp54Q8BL06 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Usp54Q8BL06 Mir698-201ENSMUST00000102164 109 ntBASIC20■□□□□ 0.79
Usp54Q8BL06 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC20■□□□□ 0.79
Usp54Q8BL06 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Usp54Q8BL06 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC20■□□□□ 0.79
Usp54Q8BL06 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC20■□□□□ 0.79
Usp54Q8BL06 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Usp54Q8BL06 Gm8584-201ENSMUST00000171982 758 ntBASIC20■□□□□ 0.79
Usp54Q8BL06 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC20■□□□□ 0.79
Usp54Q8BL06 Gm43133-201ENSMUST00000197472 463 ntBASIC20■□□□□ 0.79
Usp54Q8BL06 Gm6013-201ENSMUST00000212264 699 ntBASIC20■□□□□ 0.79
Usp54Q8BL06 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Usp54Q8BL06 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Usp54Q8BL06 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Usp54Q8BL06 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Usp54Q8BL06 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Usp54Q8BL06 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Usp54Q8BL06 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC20■□□□□ 0.79
Usp54Q8BL06 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC20■□□□□ 0.79
Usp54Q8BL06 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC20■□□□□ 0.79
Usp54Q8BL06 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Usp54Q8BL06 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC20■□□□□ 0.79
Usp54Q8BL06 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Usp54Q8BL06 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Usp54Q8BL06 Gm10584-201ENSMUST00000207036 2628 ntBASIC20■□□□□ 0.79
Usp54Q8BL06 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Usp54Q8BL06 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC20■□□□□ 0.79
Usp54Q8BL06 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Usp54Q8BL06 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Usp54Q8BL06 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC20■□□□□ 0.79
Usp54Q8BL06 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Usp54Q8BL06 Gm7029-201ENSMUST00000173226 450 ntBASIC20■□□□□ 0.79
Usp54Q8BL06 Gm9124-201ENSMUST00000191789 1092 ntBASIC20■□□□□ 0.79
Usp54Q8BL06 Gm9113-201ENSMUST00000192510 1018 ntBASIC20■□□□□ 0.79
Usp54Q8BL06 Gm9131-201ENSMUST00000193557 1089 ntBASIC20■□□□□ 0.79
Usp54Q8BL06 Gm9121-201ENSMUST00000193749 1071 ntBASIC20■□□□□ 0.79
Usp54Q8BL06 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Usp54Q8BL06 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Usp54Q8BL06 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Usp54Q8BL06 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Usp54Q8BL06 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms