Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdh20Q8BIZ0 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdh20Q8BIZ0 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Pcdh20Q8BIZ0 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC14.02□□□□□ -0.16
Pcdh20Q8BIZ0 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdh20Q8BIZ0 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdh20Q8BIZ0 Gm13410-201ENSMUST00000117058 1415 ntBASIC14.02□□□□□ -0.16
Pcdh20Q8BIZ0 Gm23935-201ENSMUST00000102303 57 ntBASIC14.02□□□□□ -0.17
Pcdh20Q8BIZ0 Gm24270-201ENSMUST00000102326 57 ntBASIC14.02□□□□□ -0.17
Pcdh20Q8BIZ0 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdh20Q8BIZ0 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC14.02□□□□□ -0.17
Pcdh20Q8BIZ0 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC14.02□□□□□ -0.17
Pcdh20Q8BIZ0 Gm24245-201ENSMUST00000157318 57 ntBASIC14.02□□□□□ -0.17
Pcdh20Q8BIZ0 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC14.02□□□□□ -0.17
Pcdh20Q8BIZ0 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC14.02□□□□□ -0.17
Pcdh20Q8BIZ0 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Pcdh20Q8BIZ0 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC14.02□□□□□ -0.17
Pcdh20Q8BIZ0 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdh20Q8BIZ0 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdh20Q8BIZ0 Gm37691-201ENSMUST00000192147 2573 ntBASIC14.02□□□□□ -0.17
Pcdh20Q8BIZ0 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdh20Q8BIZ0 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdh20Q8BIZ0 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdh20Q8BIZ0 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdh20Q8BIZ0 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdh20Q8BIZ0 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdh20Q8BIZ0 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdh20Q8BIZ0 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdh20Q8BIZ0 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Pcdh20Q8BIZ0 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC14.02□□□□□ -0.17
Pcdh20Q8BIZ0 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdh20Q8BIZ0 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
Pcdh20Q8BIZ0 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdh20Q8BIZ0 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh20Q8BIZ0 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Pcdh20Q8BIZ0 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh20Q8BIZ0 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh20Q8BIZ0 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.01□□□□□ -0.17
Pcdh20Q8BIZ0 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh20Q8BIZ0 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh20Q8BIZ0 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh20Q8BIZ0 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh20Q8BIZ0 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh20Q8BIZ0 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh20Q8BIZ0 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh20Q8BIZ0 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh20Q8BIZ0 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh20Q8BIZ0 Gm12892-201ENSMUST00000117367 1146 ntBASIC14.01□□□□□ -0.17
Pcdh20Q8BIZ0 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC14.01□□□□□ -0.17
Pcdh20Q8BIZ0 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh20Q8BIZ0 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC14.01□□□□□ -0.17
Pcdh20Q8BIZ0 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC14.01□□□□□ -0.17
Pcdh20Q8BIZ0 AC151286.1-201ENSMUST00000198489 145 ntBASIC14.01□□□□□ -0.17
Pcdh20Q8BIZ0 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh20Q8BIZ0 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC14.01□□□□□ -0.17
Pcdh20Q8BIZ0 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.01□□□□□ -0.17
Pcdh20Q8BIZ0 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh20Q8BIZ0 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh20Q8BIZ0 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh20Q8BIZ0 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh20Q8BIZ0 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh20Q8BIZ0 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh20Q8BIZ0 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Pcdh20Q8BIZ0 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh20Q8BIZ0 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh20Q8BIZ0 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Pcdh20Q8BIZ0 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh20Q8BIZ0 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Pcdh20Q8BIZ0 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh20Q8BIZ0 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdh20Q8BIZ0 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC14□□□□□ -0.17
Pcdh20Q8BIZ0 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdh20Q8BIZ0 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Pcdh20Q8BIZ0 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC14□□□□□ -0.17
Pcdh20Q8BIZ0 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC14□□□□□ -0.17
Pcdh20Q8BIZ0 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdh20Q8BIZ0 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdh20Q8BIZ0 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC14□□□□□ -0.17
Pcdh20Q8BIZ0 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdh20Q8BIZ0 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdh20Q8BIZ0 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC14□□□□□ -0.17
Pcdh20Q8BIZ0 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC14□□□□□ -0.17
Pcdh20Q8BIZ0 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC14□□□□□ -0.17
Pcdh20Q8BIZ0 Mir1895-201ENSMUST00000122615 79 ntBASIC14□□□□□ -0.17
Pcdh20Q8BIZ0 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC14□□□□□ -0.17
Pcdh20Q8BIZ0 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC14□□□□□ -0.17
Pcdh20Q8BIZ0 Gm45612-201ENSMUST00000211320 160 ntBASIC14□□□□□ -0.17
Pcdh20Q8BIZ0 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC14□□□□□ -0.17
Pcdh20Q8BIZ0 AC124549.3-201ENSMUST00000225541 367 ntBASIC14□□□□□ -0.17
Pcdh20Q8BIZ0 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC14□□□□□ -0.17
Pcdh20Q8BIZ0 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC14□□□□□ -0.17
Pcdh20Q8BIZ0 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC14□□□□□ -0.17
Pcdh20Q8BIZ0 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Pcdh20Q8BIZ0 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdh20Q8BIZ0 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdh20Q8BIZ0 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdh20Q8BIZ0 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdh20Q8BIZ0 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC13.99□□□□□ -0.17
Pcdh20Q8BIZ0 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Pcdh20Q8BIZ0 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms