Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim6Q8BGE7 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Trim6Q8BGE7 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC15.25■□□□□ 0.03
Trim6Q8BGE7 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim6Q8BGE7 AC025913.2-201ENSMUST00000220136 1766 ntBASIC15.25■□□□□ 0.03
Trim6Q8BGE7 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim6Q8BGE7 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim6Q8BGE7 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim6Q8BGE7 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim6Q8BGE7 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim6Q8BGE7 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC15.25■□□□□ 0.03
Trim6Q8BGE7 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim6Q8BGE7 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC15.25■□□□□ 0.03
Trim6Q8BGE7 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim6Q8BGE7 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim6Q8BGE7 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC15.25■□□□□ 0.03
Trim6Q8BGE7 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC15.24■□□□□ 0.03
Trim6Q8BGE7 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trim6Q8BGE7 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim6Q8BGE7 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim6Q8BGE7 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim6Q8BGE7 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trim6Q8BGE7 Gm4081-201ENSMUST00000195287 1838 ntBASIC15.24■□□□□ 0.03
Trim6Q8BGE7 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim6Q8BGE7 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trim6Q8BGE7 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim6Q8BGE7 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim6Q8BGE7 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim6Q8BGE7 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC15.24■□□□□ 0.03
Trim6Q8BGE7 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Trim6Q8BGE7 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trim6Q8BGE7 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim6Q8BGE7 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trim6Q8BGE7 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trim6Q8BGE7 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC15.24■□□□□ 0.03
Trim6Q8BGE7 Gm34391-201ENSMUST00000203706 907 ntBASIC15.24■□□□□ 0.03
Trim6Q8BGE7 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC15.24■□□□□ 0.03
Trim6Q8BGE7 AC155729.1-201ENSMUST00000227758 544 ntBASIC15.24■□□□□ 0.03
Trim6Q8BGE7 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim6Q8BGE7 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim6Q8BGE7 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim6Q8BGE7 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim6Q8BGE7 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim6Q8BGE7 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim6Q8BGE7 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim6Q8BGE7 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim6Q8BGE7 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC15.24■□□□□ 0.03
Trim6Q8BGE7 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC15.24■□□□□ 0.03
Trim6Q8BGE7 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trim6Q8BGE7 AC126250.1-201ENSMUST00000228343 1768 ntBASIC15.24■□□□□ 0.03
Trim6Q8BGE7 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim6Q8BGE7 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim6Q8BGE7 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim6Q8BGE7 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trim6Q8BGE7 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim6Q8BGE7 Gm5366-201ENSMUST00000215494 1338 ntBASIC15.23■□□□□ 0.03
Trim6Q8BGE7 AC119177.1-201ENSMUST00000227647 1332 ntBASIC15.23■□□□□ 0.03
Trim6Q8BGE7 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim6Q8BGE7 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trim6Q8BGE7 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim6Q8BGE7 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim6Q8BGE7 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim6Q8BGE7 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC15.23■□□□□ 0.03
Trim6Q8BGE7 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim6Q8BGE7 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim6Q8BGE7 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim6Q8BGE7 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC15.23■□□□□ 0.03
Trim6Q8BGE7 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC15.23■□□□□ 0.03
Trim6Q8BGE7 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC15.23■□□□□ 0.03
Trim6Q8BGE7 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trim6Q8BGE7 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Trim6Q8BGE7 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC15.23■□□□□ 0.03
Trim6Q8BGE7 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trim6Q8BGE7 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC15.23■□□□□ 0.03
Trim6Q8BGE7 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim6Q8BGE7 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim6Q8BGE7 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim6Q8BGE7 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Trim6Q8BGE7 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Trim6Q8BGE7 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim6Q8BGE7 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim6Q8BGE7 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim6Q8BGE7 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim6Q8BGE7 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trim6Q8BGE7 Gm11405-201ENSMUST00000118689 1556 ntBASIC15.23■□□□□ 0.03
Trim6Q8BGE7 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trim6Q8BGE7 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Trim6Q8BGE7 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim6Q8BGE7 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim6Q8BGE7 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trim6Q8BGE7 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim6Q8BGE7 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Trim6Q8BGE7 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim6Q8BGE7 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC15.22■□□□□ 0.03
Trim6Q8BGE7 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trim6Q8BGE7 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Trim6Q8BGE7 Gm37844-201ENSMUST00000192473 4097 ntBASIC15.22■□□□□ 0.03
Trim6Q8BGE7 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim6Q8BGE7 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim6Q8BGE7 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms