Protein–RNA interactions for Protein: Q8BGD7

Npas4, Neuronal PAS domain-containing protein 4, mousemouse

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas4Q8BGD7 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Npas4Q8BGD7 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Npas4Q8BGD7 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
Npas4Q8BGD7 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC15.03■□□□□ -0
Npas4Q8BGD7 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC15.03■□□□□ -0
Npas4Q8BGD7 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC15.03■□□□□ -0
Npas4Q8BGD7 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Npas4Q8BGD7 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Npas4Q8BGD7 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Npas4Q8BGD7 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Npas4Q8BGD7 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Npas4Q8BGD7 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC15.03■□□□□ -0
Npas4Q8BGD7 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Npas4Q8BGD7 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
Npas4Q8BGD7 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Npas4Q8BGD7 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC15.03■□□□□ -0
Npas4Q8BGD7 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Npas4Q8BGD7 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Npas4Q8BGD7 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC15.03■□□□□ -0
Npas4Q8BGD7 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC15.03■□□□□ -0
Npas4Q8BGD7 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Npas4Q8BGD7 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC15.03■□□□□ -0
Npas4Q8BGD7 AC102291.3-201ENSMUST00000226566 405 ntBASIC15.03■□□□□ -0
Npas4Q8BGD7 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Npas4Q8BGD7 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Npas4Q8BGD7 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC15.03■□□□□ -0
Npas4Q8BGD7 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Npas4Q8BGD7 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Npas4Q8BGD7 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Npas4Q8BGD7 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Npas4Q8BGD7 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC15.03■□□□□ -0
Npas4Q8BGD7 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Npas4Q8BGD7 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Npas4Q8BGD7 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Npas4Q8BGD7 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Npas4Q8BGD7 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Npas4Q8BGD7 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC15.02■□□□□ -0
Npas4Q8BGD7 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC15.02■□□□□ -0
Npas4Q8BGD7 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Npas4Q8BGD7 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC15.02■□□□□ -0
Npas4Q8BGD7 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC15.02■□□□□ -0
Npas4Q8BGD7 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Npas4Q8BGD7 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Npas4Q8BGD7 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Npas4Q8BGD7 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Npas4Q8BGD7 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Npas4Q8BGD7 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Npas4Q8BGD7 Gm27839-201ENSMUST00000184242 106 ntBASIC15.02■□□□□ -0
Npas4Q8BGD7 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Npas4Q8BGD7 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC15.02■□□□□ -0
Npas4Q8BGD7 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC15.02■□□□□ -0
Npas4Q8BGD7 AC139350.3-201ENSMUST00000226151 420 ntBASIC15.02■□□□□ -0
Npas4Q8BGD7 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Npas4Q8BGD7 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Npas4Q8BGD7 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC15.02■□□□□ -0
Npas4Q8BGD7 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Npas4Q8BGD7 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Npas4Q8BGD7 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Npas4Q8BGD7 Gm42918-201ENSMUST00000199249 1580 ntBASIC15.02□□□□□ -0.01
Npas4Q8BGD7 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Npas4Q8BGD7 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Npas4Q8BGD7 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Npas4Q8BGD7 AC174678.1-201ENSMUST00000228007 2749 ntBASIC15.01□□□□□ -0.01
Npas4Q8BGD7 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC15.01□□□□□ -0.01
Npas4Q8BGD7 Gm9816-201ENSMUST00000122292 1414 ntBASIC15.01□□□□□ -0.01
Npas4Q8BGD7 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Npas4Q8BGD7 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Npas4Q8BGD7 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Npas4Q8BGD7 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Npas4Q8BGD7 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Npas4Q8BGD7 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Npas4Q8BGD7 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Npas4Q8BGD7 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Npas4Q8BGD7 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
Npas4Q8BGD7 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Npas4Q8BGD7 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Npas4Q8BGD7 Mir1982-201ENSMUST00000157368 74 ntBASIC15.01□□□□□ -0.01
Npas4Q8BGD7 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Npas4Q8BGD7 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Npas4Q8BGD7 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Npas4Q8BGD7 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Npas4Q8BGD7 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Npas4Q8BGD7 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Npas4Q8BGD7 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Npas4Q8BGD7 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Npas4Q8BGD7 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Npas4Q8BGD7 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Npas4Q8BGD7 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Npas4Q8BGD7 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Npas4Q8BGD7 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Npas4Q8BGD7 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Npas4Q8BGD7 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC15.01□□□□□ -0.01
Npas4Q8BGD7 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Npas4Q8BGD7 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Npas4Q8BGD7 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Npas4Q8BGD7 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC15□□□□□ -0.01
Npas4Q8BGD7 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC15□□□□□ -0.01
Npas4Q8BGD7 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Npas4Q8BGD7 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Npas4Q8BGD7 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms