Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ubp1Q811S7 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ubp1Q811S7 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ubp1Q811S7 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Ubp1Q811S7 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Ubp1Q811S7 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Ubp1Q811S7 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ubp1Q811S7 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ubp1Q811S7 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ubp1Q811S7 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
Ubp1Q811S7 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ubp1Q811S7 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ubp1Q811S7 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Ubp1Q811S7 Gm42466-201ENSMUST00000202099 1301 ntBASIC14.15□□□□□ -0.14
Ubp1Q811S7 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ubp1Q811S7 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Ubp1Q811S7 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Ubp1Q811S7 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ubp1Q811S7 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ubp1Q811S7 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ubp1Q811S7 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Ubp1Q811S7 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ubp1Q811S7 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ubp1Q811S7 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.15□□□□□ -0.14
Ubp1Q811S7 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.15□□□□□ -0.14
Ubp1Q811S7 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ubp1Q811S7 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Ubp1Q811S7 Gm10253-201ENSMUST00000194270 940 ntBASIC14.15□□□□□ -0.14
Ubp1Q811S7 Gm18049-201ENSMUST00000208909 581 ntBASIC14.15□□□□□ -0.14
Ubp1Q811S7 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ubp1Q811S7 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ubp1Q811S7 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Ubp1Q811S7 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Ubp1Q811S7 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.15□□□□□ -0.14
Ubp1Q811S7 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ubp1Q811S7 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ubp1Q811S7 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ubp1Q811S7 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ubp1Q811S7 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ubp1Q811S7 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ubp1Q811S7 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ubp1Q811S7 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Ubp1Q811S7 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ubp1Q811S7 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ubp1Q811S7 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
Ubp1Q811S7 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ubp1Q811S7 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ubp1Q811S7 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ubp1Q811S7 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ubp1Q811S7 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ubp1Q811S7 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ubp1Q811S7 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ubp1Q811S7 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ubp1Q811S7 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ubp1Q811S7 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC14.14□□□□□ -0.15
Ubp1Q811S7 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC14.14□□□□□ -0.15
Ubp1Q811S7 Gm25948-201ENSMUST00000175334 112 ntBASIC14.14□□□□□ -0.15
Ubp1Q811S7 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC14.14□□□□□ -0.15
Ubp1Q811S7 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ubp1Q811S7 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC14.14□□□□□ -0.15
Ubp1Q811S7 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ubp1Q811S7 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ubp1Q811S7 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ubp1Q811S7 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ubp1Q811S7 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC14.14□□□□□ -0.15
Ubp1Q811S7 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ubp1Q811S7 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ubp1Q811S7 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ubp1Q811S7 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Ubp1Q811S7 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.14□□□□□ -0.15
Ubp1Q811S7 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ubp1Q811S7 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ubp1Q811S7 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ubp1Q811S7 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Ubp1Q811S7 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ubp1Q811S7 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ubp1Q811S7 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ubp1Q811S7 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Ubp1Q811S7 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ubp1Q811S7 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ubp1Q811S7 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC14.13□□□□□ -0.15
Ubp1Q811S7 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ubp1Q811S7 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Ubp1Q811S7 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Ubp1Q811S7 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Ubp1Q811S7 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ubp1Q811S7 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Ubp1Q811S7 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Ubp1Q811S7 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ubp1Q811S7 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC14.13□□□□□ -0.15
Ubp1Q811S7 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC14.13□□□□□ -0.15
Ubp1Q811S7 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14.13□□□□□ -0.15
Ubp1Q811S7 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC14.13□□□□□ -0.15
Ubp1Q811S7 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Ubp1Q811S7 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Ubp1Q811S7 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ubp1Q811S7 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ubp1Q811S7 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Ubp1Q811S7 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ubp1Q811S7 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms