Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC16.01■□□□□ 0.15
Trnp1Q80ZI1 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trnp1Q80ZI1 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trnp1Q80ZI1 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trnp1Q80ZI1 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trnp1Q80ZI1 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trnp1Q80ZI1 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trnp1Q80ZI1 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
Trnp1Q80ZI1 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trnp1Q80ZI1 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trnp1Q80ZI1 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trnp1Q80ZI1 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Trnp1Q80ZI1 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trnp1Q80ZI1 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trnp1Q80ZI1 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC16.01■□□□□ 0.15
Trnp1Q80ZI1 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trnp1Q80ZI1 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trnp1Q80ZI1 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trnp1Q80ZI1 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trnp1Q80ZI1 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trnp1Q80ZI1 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trnp1Q80ZI1 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trnp1Q80ZI1 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trnp1Q80ZI1 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC16.01■□□□□ 0.15
Trnp1Q80ZI1 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trnp1Q80ZI1 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC16.01■□□□□ 0.15
Trnp1Q80ZI1 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Trnp1Q80ZI1 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trnp1Q80ZI1 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trnp1Q80ZI1 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
Trnp1Q80ZI1 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trnp1Q80ZI1 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trnp1Q80ZI1 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trnp1Q80ZI1 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trnp1Q80ZI1 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Trnp1Q80ZI1 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trnp1Q80ZI1 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC16■□□□□ 0.15
Trnp1Q80ZI1 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trnp1Q80ZI1 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trnp1Q80ZI1 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trnp1Q80ZI1 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trnp1Q80ZI1 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Trnp1Q80ZI1 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC16■□□□□ 0.15
Trnp1Q80ZI1 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
Trnp1Q80ZI1 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC16■□□□□ 0.15
Trnp1Q80ZI1 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC16■□□□□ 0.15
Trnp1Q80ZI1 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trnp1Q80ZI1 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trnp1Q80ZI1 Gm19184-201ENSMUST00000196798 928 ntBASIC16■□□□□ 0.15
Trnp1Q80ZI1 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC16■□□□□ 0.15
Trnp1Q80ZI1 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC16■□□□□ 0.15
Trnp1Q80ZI1 Gm8598-201ENSMUST00000221184 836 ntBASIC16■□□□□ 0.15
Trnp1Q80ZI1 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC16■□□□□ 0.15
Trnp1Q80ZI1 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16■□□□□ 0.15
Trnp1Q80ZI1 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Trnp1Q80ZI1 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trnp1Q80ZI1 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trnp1Q80ZI1 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trnp1Q80ZI1 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trnp1Q80ZI1 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trnp1Q80ZI1 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Trnp1Q80ZI1 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trnp1Q80ZI1 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trnp1Q80ZI1 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trnp1Q80ZI1 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trnp1Q80ZI1 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
Trnp1Q80ZI1 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trnp1Q80ZI1 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Trnp1Q80ZI1 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trnp1Q80ZI1 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Trnp1Q80ZI1 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
Trnp1Q80ZI1 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trnp1Q80ZI1 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trnp1Q80ZI1 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trnp1Q80ZI1 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Trnp1Q80ZI1 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trnp1Q80ZI1 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Trnp1Q80ZI1 Mir8109-201ENSMUST00000184375 117 ntBASIC15.99■□□□□ 0.15
Trnp1Q80ZI1 Gm38241-201ENSMUST00000192641 898 ntBASIC15.99■□□□□ 0.15
Trnp1Q80ZI1 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trnp1Q80ZI1 Gm3961-201ENSMUST00000204425 994 ntBASIC15.99■□□□□ 0.15
Trnp1Q80ZI1 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trnp1Q80ZI1 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trnp1Q80ZI1 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Trnp1Q80ZI1 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
Trnp1Q80ZI1 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trnp1Q80ZI1 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC15.99■□□□□ 0.15
Trnp1Q80ZI1 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trnp1Q80ZI1 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trnp1Q80ZI1 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trnp1Q80ZI1 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trnp1Q80ZI1 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trnp1Q80ZI1 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Trnp1Q80ZI1 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trnp1Q80ZI1 Gm12846-201ENSMUST00000120431 1373 ntBASIC15.99■□□□□ 0.15
Trnp1Q80ZI1 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trnp1Q80ZI1 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trnp1Q80ZI1 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trnp1Q80ZI1 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trnp1Q80ZI1 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms