Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp8Q80U87 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp8Q80U87 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp8Q80U87 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Usp8Q80U87 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp8Q80U87 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp8Q80U87 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp8Q80U87 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp8Q80U87 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
Usp8Q80U87 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Usp8Q80U87 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Usp8Q80U87 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Usp8Q80U87 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp8Q80U87 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp8Q80U87 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Usp8Q80U87 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Usp8Q80U87 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp8Q80U87 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp8Q80U87 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC14.4□□□□□ -0.1
Usp8Q80U87 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
Usp8Q80U87 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp8Q80U87 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp8Q80U87 Gm27741-201ENSMUST00000185060 237 ntBASIC14.4□□□□□ -0.1
Usp8Q80U87 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp8Q80U87 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp8Q80U87 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp8Q80U87 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp8Q80U87 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC14.4□□□□□ -0.1
Usp8Q80U87 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC14.4□□□□□ -0.1
Usp8Q80U87 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp8Q80U87 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp8Q80U87 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp8Q80U87 Gm37844-201ENSMUST00000192473 4097 ntBASIC14.4□□□□□ -0.1
Usp8Q80U87 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp8Q80U87 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.39□□□□□ -0.11
Usp8Q80U87 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp8Q80U87 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp8Q80U87 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Usp8Q80U87 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp8Q80U87 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp8Q80U87 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp8Q80U87 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC14.39□□□□□ -0.11
Usp8Q80U87 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp8Q80U87 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp8Q80U87 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp8Q80U87 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.39□□□□□ -0.11
Usp8Q80U87 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Usp8Q80U87 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp8Q80U87 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp8Q80U87 Gm8749-201ENSMUST00000117737 331 ntBASIC14.39□□□□□ -0.11
Usp8Q80U87 Gm13464-201ENSMUST00000119418 935 ntBASIC14.39□□□□□ -0.11
Usp8Q80U87 Gm14140-201ENSMUST00000119999 995 ntBASIC14.39□□□□□ -0.11
Usp8Q80U87 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC14.39□□□□□ -0.11
Usp8Q80U87 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC14.39□□□□□ -0.11
Usp8Q80U87 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC14.39□□□□□ -0.11
Usp8Q80U87 AC154222.1-201ENSMUST00000223882 475 ntBASIC14.39□□□□□ -0.11
Usp8Q80U87 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC14.39□□□□□ -0.11
Usp8Q80U87 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp8Q80U87 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp8Q80U87 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp8Q80U87 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Usp8Q80U87 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Usp8Q80U87 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp8Q80U87 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp8Q80U87 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp8Q80U87 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp8Q80U87 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Usp8Q80U87 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp8Q80U87 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp8Q80U87 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Usp8Q80U87 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp8Q80U87 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp8Q80U87 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp8Q80U87 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp8Q80U87 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp8Q80U87 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp8Q80U87 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp8Q80U87 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp8Q80U87 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp8Q80U87 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp8Q80U87 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp8Q80U87 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC14.38□□□□□ -0.11
Usp8Q80U87 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp8Q80U87 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp8Q80U87 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp8Q80U87 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp8Q80U87 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp8Q80U87 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC14.38□□□□□ -0.11
Usp8Q80U87 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Usp8Q80U87 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC14.38□□□□□ -0.11
Usp8Q80U87 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Usp8Q80U87 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC14.38□□□□□ -0.11
Usp8Q80U87 Gm8597-201ENSMUST00000191525 1109 ntBASIC14.38□□□□□ -0.11
Usp8Q80U87 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC14.38□□□□□ -0.11
Usp8Q80U87 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp8Q80U87 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC14.38□□□□□ -0.11
Usp8Q80U87 Gm10154-201ENSMUST00000084445 354 ntBASIC14.38□□□□□ -0.11
Usp8Q80U87 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Usp8Q80U87 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Usp8Q80U87 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms