Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ddx55Q6ZPL9 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Ddx55Q6ZPL9 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ddx55Q6ZPL9 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
Ddx55Q6ZPL9 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ddx55Q6ZPL9 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ddx55Q6ZPL9 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ddx55Q6ZPL9 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ddx55Q6ZPL9 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Ddx55Q6ZPL9 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ddx55Q6ZPL9 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC16.2■□□□□ 0.18
Ddx55Q6ZPL9 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC16.2■□□□□ 0.18
Ddx55Q6ZPL9 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ddx55Q6ZPL9 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ddx55Q6ZPL9 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Ddx55Q6ZPL9 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ddx55Q6ZPL9 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC16.2■□□□□ 0.18
Ddx55Q6ZPL9 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC16.2■□□□□ 0.18
Ddx55Q6ZPL9 Gm24196-201ENSMUST00000179161 110 ntBASIC16.2■□□□□ 0.18
Ddx55Q6ZPL9 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC16.2■□□□□ 0.18
Ddx55Q6ZPL9 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC16.2■□□□□ 0.18
Ddx55Q6ZPL9 Gm9299-201ENSMUST00000206392 1140 ntBASIC16.2■□□□□ 0.18
Ddx55Q6ZPL9 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ddx55Q6ZPL9 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ddx55Q6ZPL9 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Ddx55Q6ZPL9 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ddx55Q6ZPL9 Gm21038-201ENSMUST00000222205 1383 ntBASIC16.2■□□□□ 0.18
Ddx55Q6ZPL9 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ddx55Q6ZPL9 AC174678.1-201ENSMUST00000228007 2749 ntBASIC16.2■□□□□ 0.18
Ddx55Q6ZPL9 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ddx55Q6ZPL9 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ddx55Q6ZPL9 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Ddx55Q6ZPL9 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ddx55Q6ZPL9 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ddx55Q6ZPL9 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ddx55Q6ZPL9 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ddx55Q6ZPL9 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ddx55Q6ZPL9 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Ddx55Q6ZPL9 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ddx55Q6ZPL9 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC16.19■□□□□ 0.18
Ddx55Q6ZPL9 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ddx55Q6ZPL9 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ddx55Q6ZPL9 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ddx55Q6ZPL9 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ddx55Q6ZPL9 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ddx55Q6ZPL9 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ddx55Q6ZPL9 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ddx55Q6ZPL9 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ddx55Q6ZPL9 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Ddx55Q6ZPL9 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ddx55Q6ZPL9 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC16.19■□□□□ 0.18
Ddx55Q6ZPL9 Gm11557-201ENSMUST00000120200 1008 ntBASIC16.19■□□□□ 0.18
Ddx55Q6ZPL9 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC16.19■□□□□ 0.18
Ddx55Q6ZPL9 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC16.19■□□□□ 0.18
Ddx55Q6ZPL9 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC16.19■□□□□ 0.18
Ddx55Q6ZPL9 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
Ddx55Q6ZPL9 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Ddx55Q6ZPL9 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
Ddx55Q6ZPL9 Gm8927-201ENSMUST00000181978 981 ntBASIC16.19■□□□□ 0.18
Ddx55Q6ZPL9 Gm29649-201ENSMUST00000185649 419 ntBASIC16.19■□□□□ 0.18
Ddx55Q6ZPL9 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC16.19■□□□□ 0.18
Ddx55Q6ZPL9 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC16.19■□□□□ 0.18
Ddx55Q6ZPL9 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ddx55Q6ZPL9 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ddx55Q6ZPL9 Gm3222-201ENSMUST00000071282 990 ntBASIC16.19■□□□□ 0.18
Ddx55Q6ZPL9 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ddx55Q6ZPL9 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ddx55Q6ZPL9 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ddx55Q6ZPL9 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ddx55Q6ZPL9 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
Ddx55Q6ZPL9 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ddx55Q6ZPL9 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ddx55Q6ZPL9 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.19■□□□□ 0.18
Ddx55Q6ZPL9 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Ddx55Q6ZPL9 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ddx55Q6ZPL9 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ddx55Q6ZPL9 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ddx55Q6ZPL9 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ddx55Q6ZPL9 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ddx55Q6ZPL9 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ddx55Q6ZPL9 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ddx55Q6ZPL9 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ddx55Q6ZPL9 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
Ddx55Q6ZPL9 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ddx55Q6ZPL9 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
Ddx55Q6ZPL9 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ddx55Q6ZPL9 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ddx55Q6ZPL9 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ddx55Q6ZPL9 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ddx55Q6ZPL9 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
Ddx55Q6ZPL9 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ddx55Q6ZPL9 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ddx55Q6ZPL9 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ddx55Q6ZPL9 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC16.18■□□□□ 0.18
Ddx55Q6ZPL9 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ddx55Q6ZPL9 Gm42442-201ENSMUST00000197951 1133 ntBASIC16.18■□□□□ 0.18
Ddx55Q6ZPL9 AC159896.2-201ENSMUST00000214753 269 ntBASIC16.18■□□□□ 0.18
Ddx55Q6ZPL9 Gm6983-201ENSMUST00000214912 628 ntBASIC16.18■□□□□ 0.18
Ddx55Q6ZPL9 AC154319.1-201ENSMUST00000216330 312 ntBASIC16.18■□□□□ 0.18
Ddx55Q6ZPL9 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms