Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rif1Q6PR54 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rif1Q6PR54 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rif1Q6PR54 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rif1Q6PR54 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC12.06□□□□□ -0.48
Rif1Q6PR54 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rif1Q6PR54 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rif1Q6PR54 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rif1Q6PR54 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rif1Q6PR54 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Rif1Q6PR54 Gm14665-201ENSMUST00000122294 557 ntBASIC12.06□□□□□ -0.48
Rif1Q6PR54 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC12.06□□□□□ -0.48
Rif1Q6PR54 Gm43378-201ENSMUST00000199336 582 ntBASIC12.06□□□□□ -0.48
Rif1Q6PR54 Gm38671-201ENSMUST00000200573 130 ntBASIC12.06□□□□□ -0.48
Rif1Q6PR54 Gm8598-201ENSMUST00000221184 836 ntBASIC12.06□□□□□ -0.48
Rif1Q6PR54 Rbfox2-206ENSMUST00000227314 1810 ntBASIC12.06□□□□□ -0.48
Rif1Q6PR54 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rif1Q6PR54 Gm28265-201ENSMUST00000188201 2319 ntBASIC12.06□□□□□ -0.48
Rif1Q6PR54 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Rif1Q6PR54 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rif1Q6PR54 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC12.05□□□□□ -0.48
Rif1Q6PR54 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rif1Q6PR54 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rif1Q6PR54 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rif1Q6PR54 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rif1Q6PR54 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC12.05□□□□□ -0.48
Rif1Q6PR54 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Rif1Q6PR54 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rif1Q6PR54 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rif1Q6PR54 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rif1Q6PR54 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rif1Q6PR54 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rif1Q6PR54 Gm5276-201ENSMUST00000196683 1047 ntBASIC12.05□□□□□ -0.48
Rif1Q6PR54 Gm8285-201ENSMUST00000208293 759 ntBASIC12.05□□□□□ -0.48
Rif1Q6PR54 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC12.05□□□□□ -0.48
Rif1Q6PR54 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rif1Q6PR54 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rif1Q6PR54 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
Rif1Q6PR54 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Rif1Q6PR54 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC12.05□□□□□ -0.48
Rif1Q6PR54 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC12.05□□□□□ -0.48
Rif1Q6PR54 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rif1Q6PR54 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rif1Q6PR54 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Rif1Q6PR54 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Rif1Q6PR54 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
Rif1Q6PR54 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rif1Q6PR54 Gm27331-201ENSMUST00000183705 60 ntBASIC12.05□□□□□ -0.48
Rif1Q6PR54 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Rif1Q6PR54 Gm19208-201ENSMUST00000213861 912 ntBASIC12.05□□□□□ -0.48
Rif1Q6PR54 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rif1Q6PR54 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Rif1Q6PR54 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Rif1Q6PR54 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rif1Q6PR54 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rif1Q6PR54 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC12.04□□□□□ -0.48
Rif1Q6PR54 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rif1Q6PR54 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC12.04□□□□□ -0.48
Rif1Q6PR54 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rif1Q6PR54 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rif1Q6PR54 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Rif1Q6PR54 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rif1Q6PR54 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Rif1Q6PR54 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rif1Q6PR54 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rif1Q6PR54 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rif1Q6PR54 Ptprs-211ENSMUST00000223859 5588 ntBASIC12.04□□□□□ -0.48
Rif1Q6PR54 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rif1Q6PR54 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rif1Q6PR54 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rif1Q6PR54 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rif1Q6PR54 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rif1Q6PR54 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rif1Q6PR54 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rif1Q6PR54 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rif1Q6PR54 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rif1Q6PR54 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC12.04□□□□□ -0.48
Rif1Q6PR54 Gm7046-201ENSMUST00000221351 977 ntBASIC12.04□□□□□ -0.48
Rif1Q6PR54 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rif1Q6PR54 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rif1Q6PR54 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rif1Q6PR54 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rif1Q6PR54 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rif1Q6PR54 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rif1Q6PR54 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rif1Q6PR54 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Rif1Q6PR54 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rif1Q6PR54 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rif1Q6PR54 Gm45751-201ENSMUST00000210185 1573 ntBASIC12.04□□□□□ -0.48
Rif1Q6PR54 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Rif1Q6PR54 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Rif1Q6PR54 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rif1Q6PR54 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rif1Q6PR54 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rif1Q6PR54 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Rif1Q6PR54 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rif1Q6PR54 Gm25732-201ENSMUST00000175168 60 ntBASIC12.03□□□□□ -0.48
Rif1Q6PR54 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rif1Q6PR54 Gm37229-201ENSMUST00000191643 732 ntTSL 3 BASIC12.03□□□□□ -0.48
Rif1Q6PR54 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms