Protein–RNA interactions for Protein: Q6PIP5

Nudcd1, NudC domain-containing protein 1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd1Q6PIP5 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nudcd1Q6PIP5 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nudcd1Q6PIP5 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Nudcd1Q6PIP5 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.47□□□□□ -0.09
Nudcd1Q6PIP5 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nudcd1Q6PIP5 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Nudcd1Q6PIP5 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Nudcd1Q6PIP5 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nudcd1Q6PIP5 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nudcd1Q6PIP5 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Nudcd1Q6PIP5 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Nudcd1Q6PIP5 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Nudcd1Q6PIP5 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Nudcd1Q6PIP5 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Nudcd1Q6PIP5 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nudcd1Q6PIP5 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nudcd1Q6PIP5 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nudcd1Q6PIP5 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nudcd1Q6PIP5 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nudcd1Q6PIP5 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nudcd1Q6PIP5 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nudcd1Q6PIP5 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Nudcd1Q6PIP5 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC14.46□□□□□ -0.09
Nudcd1Q6PIP5 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
Nudcd1Q6PIP5 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Nudcd1Q6PIP5 Gm3436-201ENSMUST00000179930 840 ntBASIC14.46□□□□□ -0.09
Nudcd1Q6PIP5 AA619741-201ENSMUST00000195095 646 ntBASIC14.46□□□□□ -0.09
Nudcd1Q6PIP5 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC14.46□□□□□ -0.09
Nudcd1Q6PIP5 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nudcd1Q6PIP5 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nudcd1Q6PIP5 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Nudcd1Q6PIP5 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nudcd1Q6PIP5 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Nudcd1Q6PIP5 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nudcd1Q6PIP5 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Nudcd1Q6PIP5 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.46□□□□□ -0.09
Nudcd1Q6PIP5 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nudcd1Q6PIP5 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.46□□□□□ -0.1
Nudcd1Q6PIP5 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Nudcd1Q6PIP5 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Nudcd1Q6PIP5 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Nudcd1Q6PIP5 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Nudcd1Q6PIP5 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Nudcd1Q6PIP5 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Nudcd1Q6PIP5 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nudcd1Q6PIP5 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nudcd1Q6PIP5 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Nudcd1Q6PIP5 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nudcd1Q6PIP5 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Nudcd1Q6PIP5 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Nudcd1Q6PIP5 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nudcd1Q6PIP5 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nudcd1Q6PIP5 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Nudcd1Q6PIP5 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Nudcd1Q6PIP5 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Nudcd1Q6PIP5 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nudcd1Q6PIP5 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Nudcd1Q6PIP5 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nudcd1Q6PIP5 Gm24694-201ENSMUST00000180054 110 ntBASIC14.45□□□□□ -0.1
Nudcd1Q6PIP5 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Nudcd1Q6PIP5 Gm27663-201ENSMUST00000184839 110 ntBASIC14.45□□□□□ -0.1
Nudcd1Q6PIP5 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Nudcd1Q6PIP5 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nudcd1Q6PIP5 Arhgef33-209ENSMUST00000225223 714 ntBASIC14.45□□□□□ -0.1
Nudcd1Q6PIP5 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nudcd1Q6PIP5 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nudcd1Q6PIP5 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nudcd1Q6PIP5 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nudcd1Q6PIP5 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nudcd1Q6PIP5 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Nudcd1Q6PIP5 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nudcd1Q6PIP5 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nudcd1Q6PIP5 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nudcd1Q6PIP5 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Nudcd1Q6PIP5 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Nudcd1Q6PIP5 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nudcd1Q6PIP5 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Nudcd1Q6PIP5 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nudcd1Q6PIP5 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
Nudcd1Q6PIP5 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nudcd1Q6PIP5 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nudcd1Q6PIP5 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.45□□□□□ -0.1
Nudcd1Q6PIP5 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC14.44□□□□□ -0.1
Nudcd1Q6PIP5 Syt7-204ENSMUST00000223586 1344 ntBASIC14.44□□□□□ -0.1
Nudcd1Q6PIP5 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nudcd1Q6PIP5 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Nudcd1Q6PIP5 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nudcd1Q6PIP5 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nudcd1Q6PIP5 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Nudcd1Q6PIP5 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Nudcd1Q6PIP5 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Nudcd1Q6PIP5 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Nudcd1Q6PIP5 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Nudcd1Q6PIP5 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nudcd1Q6PIP5 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC14.44□□□□□ -0.1
Nudcd1Q6PIP5 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC14.44□□□□□ -0.1
Nudcd1Q6PIP5 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC14.44□□□□□ -0.1
Nudcd1Q6PIP5 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Nudcd1Q6PIP5 Gm10275-202ENSMUST00000168697 495 ntBASIC14.44□□□□□ -0.1
Nudcd1Q6PIP5 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms