Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcd3Q6P9Z1 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcd3Q6P9Z1 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcd3Q6P9Z1 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcd3Q6P9Z1 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcd3Q6P9Z1 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcd3Q6P9Z1 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Smarcd3Q6P9Z1 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcd3Q6P9Z1 Tcf21-202ENSMUST00000218002 1788 ntBASIC13.17□□□□□ -0.3
Smarcd3Q6P9Z1 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcd3Q6P9Z1 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcd3Q6P9Z1 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcd3Q6P9Z1 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcd3Q6P9Z1 Gm11873-201ENSMUST00000117877 1304 ntBASIC13.17□□□□□ -0.3
Smarcd3Q6P9Z1 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcd3Q6P9Z1 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC13.17□□□□□ -0.3
Smarcd3Q6P9Z1 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcd3Q6P9Z1 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcd3Q6P9Z1 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcd3Q6P9Z1 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcd3Q6P9Z1 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC13.17□□□□□ -0.3
Smarcd3Q6P9Z1 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Smarcd3Q6P9Z1 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcd3Q6P9Z1 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC13.17□□□□□ -0.3
Smarcd3Q6P9Z1 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcd3Q6P9Z1 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Smarcd3Q6P9Z1 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcd3Q6P9Z1 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC13.17□□□□□ -0.3
Smarcd3Q6P9Z1 Gm7461-201ENSMUST00000058918 827 ntBASIC13.17□□□□□ -0.3
Smarcd3Q6P9Z1 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcd3Q6P9Z1 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.17□□□□□ -0.3
Smarcd3Q6P9Z1 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Smarcd3Q6P9Z1 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcd3Q6P9Z1 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcd3Q6P9Z1 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcd3Q6P9Z1 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcd3Q6P9Z1 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.17□□□□□ -0.3
Smarcd3Q6P9Z1 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smarcd3Q6P9Z1 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Smarcd3Q6P9Z1 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Smarcd3Q6P9Z1 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Smarcd3Q6P9Z1 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smarcd3Q6P9Z1 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smarcd3Q6P9Z1 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Smarcd3Q6P9Z1 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smarcd3Q6P9Z1 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
Smarcd3Q6P9Z1 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Smarcd3Q6P9Z1 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smarcd3Q6P9Z1 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC13.16□□□□□ -0.3
Smarcd3Q6P9Z1 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC13.16□□□□□ -0.3
Smarcd3Q6P9Z1 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Smarcd3Q6P9Z1 Gm14042-201ENSMUST00000120139 833 ntBASIC13.16□□□□□ -0.3
Smarcd3Q6P9Z1 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC13.16□□□□□ -0.3
Smarcd3Q6P9Z1 Gm27628-201ENSMUST00000184911 107 ntBASIC13.16□□□□□ -0.3
Smarcd3Q6P9Z1 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Smarcd3Q6P9Z1 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Smarcd3Q6P9Z1 Olfr286-202ENSMUST00000205305 969 ntBASIC13.16□□□□□ -0.3
Smarcd3Q6P9Z1 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smarcd3Q6P9Z1 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smarcd3Q6P9Z1 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smarcd3Q6P9Z1 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Smarcd3Q6P9Z1 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC13.16□□□□□ -0.3
Smarcd3Q6P9Z1 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC13.16□□□□□ -0.3
Smarcd3Q6P9Z1 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smarcd3Q6P9Z1 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smarcd3Q6P9Z1 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smarcd3Q6P9Z1 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smarcd3Q6P9Z1 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Smarcd3Q6P9Z1 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smarcd3Q6P9Z1 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Smarcd3Q6P9Z1 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Smarcd3Q6P9Z1 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Smarcd3Q6P9Z1 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13.16□□□□□ -0.3
Smarcd3Q6P9Z1 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smarcd3Q6P9Z1 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smarcd3Q6P9Z1 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Smarcd3Q6P9Z1 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Smarcd3Q6P9Z1 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smarcd3Q6P9Z1 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcd3Q6P9Z1 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcd3Q6P9Z1 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcd3Q6P9Z1 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Smarcd3Q6P9Z1 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcd3Q6P9Z1 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcd3Q6P9Z1 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC13.15□□□□□ -0.3
Smarcd3Q6P9Z1 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcd3Q6P9Z1 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC13.15□□□□□ -0.3
Smarcd3Q6P9Z1 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcd3Q6P9Z1 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Smarcd3Q6P9Z1 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Smarcd3Q6P9Z1 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcd3Q6P9Z1 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcd3Q6P9Z1 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcd3Q6P9Z1 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcd3Q6P9Z1 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcd3Q6P9Z1 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcd3Q6P9Z1 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcd3Q6P9Z1 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcd3Q6P9Z1 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC13.15□□□□□ -0.3
Smarcd3Q6P9Z1 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms