Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sp140Q6NSQ5 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sp140Q6NSQ5 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sp140Q6NSQ5 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC14.56□□□□□ -0.08
Sp140Q6NSQ5 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sp140Q6NSQ5 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Sp140Q6NSQ5 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sp140Q6NSQ5 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sp140Q6NSQ5 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
Sp140Q6NSQ5 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
Sp140Q6NSQ5 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Sp140Q6NSQ5 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sp140Q6NSQ5 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Sp140Q6NSQ5 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.56□□□□□ -0.08
Sp140Q6NSQ5 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Sp140Q6NSQ5 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Sp140Q6NSQ5 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC14.55□□□□□ -0.08
Sp140Q6NSQ5 Nrn1-204ENSMUST00000224323 1779 ntBASIC14.55□□□□□ -0.08
Sp140Q6NSQ5 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sp140Q6NSQ5 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sp140Q6NSQ5 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sp140Q6NSQ5 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Sp140Q6NSQ5 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Sp140Q6NSQ5 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sp140Q6NSQ5 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sp140Q6NSQ5 Gm4913-201ENSMUST00000117075 1290 ntBASIC14.55□□□□□ -0.08
Sp140Q6NSQ5 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC14.55□□□□□ -0.08
Sp140Q6NSQ5 Gm12017-201ENSMUST00000122453 1003 ntBASIC14.55□□□□□ -0.08
Sp140Q6NSQ5 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC14.55□□□□□ -0.08
Sp140Q6NSQ5 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC14.55□□□□□ -0.08
Sp140Q6NSQ5 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Sp140Q6NSQ5 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sp140Q6NSQ5 Gm10275-202ENSMUST00000168697 495 ntBASIC14.55□□□□□ -0.08
Sp140Q6NSQ5 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Sp140Q6NSQ5 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sp140Q6NSQ5 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC14.55□□□□□ -0.08
Sp140Q6NSQ5 Gm10275-201ENSMUST00000092620 635 ntBASIC14.55□□□□□ -0.08
Sp140Q6NSQ5 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC14.55□□□□□ -0.08
Sp140Q6NSQ5 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Sp140Q6NSQ5 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sp140Q6NSQ5 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sp140Q6NSQ5 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sp140Q6NSQ5 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Sp140Q6NSQ5 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sp140Q6NSQ5 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sp140Q6NSQ5 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sp140Q6NSQ5 Ssr1-204ENSMUST00000225319 1610 ntBASIC14.55□□□□□ -0.08
Sp140Q6NSQ5 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sp140Q6NSQ5 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.55□□□□□ -0.08
Sp140Q6NSQ5 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.55□□□□□ -0.08
Sp140Q6NSQ5 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sp140Q6NSQ5 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sp140Q6NSQ5 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sp140Q6NSQ5 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sp140Q6NSQ5 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sp140Q6NSQ5 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sp140Q6NSQ5 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.54□□□□□ -0.08
Sp140Q6NSQ5 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Sp140Q6NSQ5 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sp140Q6NSQ5 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sp140Q6NSQ5 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sp140Q6NSQ5 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Sp140Q6NSQ5 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC14.54□□□□□ -0.08
Sp140Q6NSQ5 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sp140Q6NSQ5 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC14.54□□□□□ -0.08
Sp140Q6NSQ5 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sp140Q6NSQ5 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sp140Q6NSQ5 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sp140Q6NSQ5 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sp140Q6NSQ5 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Sp140Q6NSQ5 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sp140Q6NSQ5 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC14.54□□□□□ -0.08
Sp140Q6NSQ5 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Sp140Q6NSQ5 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Sp140Q6NSQ5 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sp140Q6NSQ5 Gm6159-201ENSMUST00000191249 1724 ntBASIC14.54□□□□□ -0.08
Sp140Q6NSQ5 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sp140Q6NSQ5 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sp140Q6NSQ5 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sp140Q6NSQ5 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sp140Q6NSQ5 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sp140Q6NSQ5 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sp140Q6NSQ5 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sp140Q6NSQ5 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sp140Q6NSQ5 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Sp140Q6NSQ5 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sp140Q6NSQ5 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Sp140Q6NSQ5 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC14.53□□□□□ -0.08
Sp140Q6NSQ5 Gm38102-201ENSMUST00000192791 1935 ntBASIC14.53□□□□□ -0.08
Sp140Q6NSQ5 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14.53□□□□□ -0.08
Sp140Q6NSQ5 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sp140Q6NSQ5 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
Sp140Q6NSQ5 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sp140Q6NSQ5 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC14.53□□□□□ -0.08
Sp140Q6NSQ5 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sp140Q6NSQ5 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Sp140Q6NSQ5 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sp140Q6NSQ5 Ighv8-7-201ENSMUST00000194349 297 ntBASIC14.53□□□□□ -0.08
Sp140Q6NSQ5 Gm5712-201ENSMUST00000199748 1043 ntBASIC14.53□□□□□ -0.08
Sp140Q6NSQ5 Gm18057-201ENSMUST00000208220 503 ntBASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms