Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Clcn1Q64347 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Clcn1Q64347 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC18.13■□□□□ 0.49
Clcn1Q64347 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Clcn1Q64347 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Clcn1Q64347 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Clcn1Q64347 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Clcn1Q64347 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Clcn1Q64347 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Clcn1Q64347 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Clcn1Q64347 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Clcn1Q64347 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC18.12■□□□□ 0.49
Clcn1Q64347 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Clcn1Q64347 Gm12960-201ENSMUST00000120017 1066 ntBASIC18.12■□□□□ 0.49
Clcn1Q64347 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Clcn1Q64347 Gm33320-201ENSMUST00000192232 530 ntBASIC18.12■□□□□ 0.49
Clcn1Q64347 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC18.12■□□□□ 0.49
Clcn1Q64347 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Clcn1Q64347 AC155286.1-201ENSMUST00000218632 448 ntBASIC18.12■□□□□ 0.49
Clcn1Q64347 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Clcn1Q64347 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Clcn1Q64347 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Clcn1Q64347 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Clcn1Q64347 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC18.12■□□□□ 0.49
Clcn1Q64347 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Clcn1Q64347 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Clcn1Q64347 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Clcn1Q64347 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Clcn1Q64347 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Clcn1Q64347 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Clcn1Q64347 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Clcn1Q64347 Gm16425-201ENSMUST00000118143 3130 ntBASIC18.12■□□□□ 0.49
Clcn1Q64347 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Clcn1Q64347 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Clcn1Q64347 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Clcn1Q64347 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Clcn1Q64347 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Clcn1Q64347 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Clcn1Q64347 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC18.11■□□□□ 0.49
Clcn1Q64347 Gm43697-201ENSMUST00000199637 2581 ntBASIC18.11■□□□□ 0.49
Clcn1Q64347 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Clcn1Q64347 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Clcn1Q64347 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Clcn1Q64347 AA619741-201ENSMUST00000195095 646 ntBASIC18.11■□□□□ 0.49
Clcn1Q64347 Gm6266-201ENSMUST00000203844 806 ntBASIC18.11■□□□□ 0.49
Clcn1Q64347 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Clcn1Q64347 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Clcn1Q64347 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Clcn1Q64347 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Clcn1Q64347 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Clcn1Q64347 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Clcn1Q64347 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Clcn1Q64347 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Clcn1Q64347 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Clcn1Q64347 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Clcn1Q64347 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Clcn1Q64347 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Clcn1Q64347 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC18.11■□□□□ 0.49
Clcn1Q64347 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Clcn1Q64347 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Clcn1Q64347 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Clcn1Q64347 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Clcn1Q64347 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Clcn1Q64347 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Clcn1Q64347 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Clcn1Q64347 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Clcn1Q64347 AC166574.6-201ENSMUST00000227889 1806 ntBASIC18.1■□□□□ 0.49
Clcn1Q64347 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Clcn1Q64347 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Clcn1Q64347 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Clcn1Q64347 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Clcn1Q64347 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Clcn1Q64347 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC18.1■□□□□ 0.49
Clcn1Q64347 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC18.1■□□□□ 0.49
Clcn1Q64347 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Clcn1Q64347 Gm5035-201ENSMUST00000215581 927 ntBASIC18.1■□□□□ 0.49
Clcn1Q64347 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Clcn1Q64347 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
Clcn1Q64347 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Clcn1Q64347 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Clcn1Q64347 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Clcn1Q64347 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Clcn1Q64347 Gm29340-201ENSMUST00000188763 3854 ntBASIC18.09■□□□□ 0.49
Clcn1Q64347 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Clcn1Q64347 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Clcn1Q64347 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Clcn1Q64347 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Clcn1Q64347 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC18.09■□□□□ 0.49
Clcn1Q64347 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Clcn1Q64347 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Clcn1Q64347 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
Clcn1Q64347 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Clcn1Q64347 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Clcn1Q64347 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Clcn1Q64347 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Clcn1Q64347 Gm17150-201ENSMUST00000165577 381 ntBASIC18.09■□□□□ 0.49
Clcn1Q64347 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Clcn1Q64347 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC18.09■□□□□ 0.49
Clcn1Q64347 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Clcn1Q64347 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms