Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
AtmQ62388 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
AtmQ62388 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
AtmQ62388 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
AtmQ62388 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
AtmQ62388 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
AtmQ62388 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
AtmQ62388 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC13.3□□□□□ -0.28
AtmQ62388 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
AtmQ62388 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
AtmQ62388 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
AtmQ62388 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC13.3□□□□□ -0.28
AtmQ62388 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC13.3□□□□□ -0.28
AtmQ62388 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
AtmQ62388 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
AtmQ62388 Gm6015-201ENSMUST00000217493 1586 ntBASIC13.3□□□□□ -0.28
AtmQ62388 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
AtmQ62388 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
AtmQ62388 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
AtmQ62388 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC13.29□□□□□ -0.28
AtmQ62388 Gm21470-201ENSMUST00000187680 696 ntBASIC13.29□□□□□ -0.28
AtmQ62388 Gm6621-201ENSMUST00000193251 772 ntBASIC13.29□□□□□ -0.28
AtmQ62388 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
AtmQ62388 Gm9252-201ENSMUST00000172364 1602 ntBASIC13.29□□□□□ -0.28
AtmQ62388 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
AtmQ62388 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
AtmQ62388 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
AtmQ62388 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
AtmQ62388 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
AtmQ62388 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC13.29□□□□□ -0.28
AtmQ62388 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC13.29□□□□□ -0.28
AtmQ62388 AC154462.2-201ENSMUST00000227519 370 ntBASIC13.29□□□□□ -0.28
AtmQ62388 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
AtmQ62388 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
AtmQ62388 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
AtmQ62388 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
AtmQ62388 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
AtmQ62388 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
AtmQ62388 Gm8805-201ENSMUST00000117848 313 ntBASIC13.28□□□□□ -0.28
AtmQ62388 n-R5s14-201ENSMUST00000122688 107 ntBASIC13.28□□□□□ -0.28
AtmQ62388 Gm6152-201ENSMUST00000151704 340 ntBASIC13.28□□□□□ -0.28
AtmQ62388 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
AtmQ62388 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
AtmQ62388 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
AtmQ62388 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
AtmQ62388 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC13.28□□□□□ -0.28
AtmQ62388 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
AtmQ62388 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
AtmQ62388 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
AtmQ62388 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
AtmQ62388 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
AtmQ62388 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
AtmQ62388 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
AtmQ62388 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
AtmQ62388 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC13.28□□□□□ -0.28
AtmQ62388 Gm6944-201ENSMUST00000182449 1006 ntBASIC13.28□□□□□ -0.28
AtmQ62388 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
AtmQ62388 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
AtmQ62388 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC13.28□□□□□ -0.28
AtmQ62388 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
AtmQ62388 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
AtmQ62388 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
AtmQ62388 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC13.28□□□□□ -0.28
AtmQ62388 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
AtmQ62388 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
AtmQ62388 Gm18556-201ENSMUST00000219748 1031 ntBASIC13.28□□□□□ -0.28
AtmQ62388 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
AtmQ62388 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
AtmQ62388 Gm21009-201ENSMUST00000197169 1669 ntBASIC13.27□□□□□ -0.28
AtmQ62388 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
AtmQ62388 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
AtmQ62388 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
AtmQ62388 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
AtmQ62388 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
AtmQ62388 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
AtmQ62388 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC13.27□□□□□ -0.28
AtmQ62388 Gm44985-201ENSMUST00000206202 1016 ntBASIC13.27□□□□□ -0.28
AtmQ62388 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
AtmQ62388 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
AtmQ62388 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
AtmQ62388 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
AtmQ62388 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC13.27□□□□□ -0.28
AtmQ62388 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
AtmQ62388 Gm37015-201ENSMUST00000192763 1521 ntBASIC13.27□□□□□ -0.29
AtmQ62388 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC13.27□□□□□ -0.29
AtmQ62388 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.29
AtmQ62388 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
AtmQ62388 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
AtmQ62388 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC13.27□□□□□ -0.29
AtmQ62388 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
AtmQ62388 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
AtmQ62388 Gm2383-201ENSMUST00000181461 807 ntBASIC13.27□□□□□ -0.29
AtmQ62388 Abhd11os-203ENSMUST00000222613 363 ntBASIC13.27□□□□□ -0.29
AtmQ62388 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
AtmQ62388 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC13.27□□□□□ -0.29
AtmQ62388 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
AtmQ62388 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC13.27□□□□□ -0.29
AtmQ62388 Gm20632-201ENSMUST00000176760 2427 ntBASIC13.27□□□□□ -0.29
AtmQ62388 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
AtmQ62388 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms