Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Scn9aQ62205 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Scn9aQ62205 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Scn9aQ62205 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Scn9aQ62205 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Scn9aQ62205 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Scn9aQ62205 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Scn9aQ62205 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Scn9aQ62205 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC16.57■□□□□ 0.24
Scn9aQ62205 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Scn9aQ62205 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Scn9aQ62205 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Scn9aQ62205 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Scn9aQ62205 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Scn9aQ62205 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC16.57■□□□□ 0.24
Scn9aQ62205 Gm5620-201ENSMUST00000077991 1348 ntBASIC16.57■□□□□ 0.24
Scn9aQ62205 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Scn9aQ62205 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Scn9aQ62205 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Scn9aQ62205 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Scn9aQ62205 Gm16570-201ENSMUST00000161951 436 ntBASIC16.57■□□□□ 0.24
Scn9aQ62205 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC16.57■□□□□ 0.24
Scn9aQ62205 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC16.57■□□□□ 0.24
Scn9aQ62205 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Scn9aQ62205 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Scn9aQ62205 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scn9aQ62205 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC16.56■□□□□ 0.24
Scn9aQ62205 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scn9aQ62205 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC16.56■□□□□ 0.24
Scn9aQ62205 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC16.56■□□□□ 0.24
Scn9aQ62205 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scn9aQ62205 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Scn9aQ62205 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Scn9aQ62205 Gm9109-201ENSMUST00000120254 1405 ntBASIC16.56■□□□□ 0.24
Scn9aQ62205 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scn9aQ62205 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Scn9aQ62205 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC16.56■□□□□ 0.24
Scn9aQ62205 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC16.56■□□□□ 0.24
Scn9aQ62205 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Scn9aQ62205 Gm9124-201ENSMUST00000191789 1092 ntBASIC16.56■□□□□ 0.24
Scn9aQ62205 Gm9113-201ENSMUST00000192510 1018 ntBASIC16.56■□□□□ 0.24
Scn9aQ62205 Gm5069-202ENSMUST00000192714 1011 ntBASIC16.56■□□□□ 0.24
Scn9aQ62205 Gm9131-201ENSMUST00000193557 1089 ntBASIC16.56■□□□□ 0.24
Scn9aQ62205 Gm9121-201ENSMUST00000193749 1071 ntBASIC16.56■□□□□ 0.24
Scn9aQ62205 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC16.56■□□□□ 0.24
Scn9aQ62205 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC16.56■□□□□ 0.24
Scn9aQ62205 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scn9aQ62205 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scn9aQ62205 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Scn9aQ62205 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Scn9aQ62205 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Scn9aQ62205 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scn9aQ62205 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
Scn9aQ62205 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scn9aQ62205 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scn9aQ62205 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scn9aQ62205 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scn9aQ62205 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scn9aQ62205 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Scn9aQ62205 Gm1335-201ENSMUST00000121653 386 ntBASIC16.55■□□□□ 0.24
Scn9aQ62205 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Scn9aQ62205 CT030704.2-201ENSMUST00000228887 494 ntBASIC16.55■□□□□ 0.24
Scn9aQ62205 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scn9aQ62205 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Scn9aQ62205 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scn9aQ62205 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Scn9aQ62205 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Scn9aQ62205 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scn9aQ62205 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scn9aQ62205 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scn9aQ62205 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Scn9aQ62205 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scn9aQ62205 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Scn9aQ62205 Gm22323-201ENSMUST00000103832 109 ntBASIC16.55■□□□□ 0.24
Scn9aQ62205 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scn9aQ62205 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC16.55■□□□□ 0.24
Scn9aQ62205 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC16.55■□□□□ 0.24
Scn9aQ62205 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Scn9aQ62205 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Scn9aQ62205 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC16.55■□□□□ 0.24
Scn9aQ62205 AC134335.2-201ENSMUST00000227660 440 ntBASIC16.55■□□□□ 0.24
Scn9aQ62205 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scn9aQ62205 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Scn9aQ62205 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scn9aQ62205 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scn9aQ62205 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Scn9aQ62205 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scn9aQ62205 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scn9aQ62205 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scn9aQ62205 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC16.54■□□□□ 0.24
Scn9aQ62205 AC154412.1-201ENSMUST00000226540 2786 ntBASIC16.54■□□□□ 0.24
Scn9aQ62205 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scn9aQ62205 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scn9aQ62205 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Scn9aQ62205 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scn9aQ62205 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scn9aQ62205 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Scn9aQ62205 Gm44364-201ENSMUST00000198368 141 ntBASIC16.54■□□□□ 0.24
Scn9aQ62205 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scn9aQ62205 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms