Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
VcanQ62059 Gm44397-201ENSMUST00000195950 113 ntBASIC13.2□□□□□ -0.3
VcanQ62059 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
VcanQ62059 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC13.2□□□□□ -0.3
VcanQ62059 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VcanQ62059 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VcanQ62059 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VcanQ62059 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VcanQ62059 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VcanQ62059 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VcanQ62059 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
VcanQ62059 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC13.2□□□□□ -0.3
VcanQ62059 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VcanQ62059 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
VcanQ62059 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
VcanQ62059 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
VcanQ62059 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
VcanQ62059 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
VcanQ62059 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VcanQ62059 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
VcanQ62059 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
VcanQ62059 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VcanQ62059 Gng12-205ENSMUST00000114226 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VcanQ62059 Gm9431-201ENSMUST00000119765 1051 ntBASIC13.19□□□□□ -0.3
VcanQ62059 Gm8810-201ENSMUST00000172895 754 ntBASIC13.19□□□□□ -0.3
VcanQ62059 Gm43058-201ENSMUST00000197645 625 ntBASIC13.19□□□□□ -0.3
VcanQ62059 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
VcanQ62059 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VcanQ62059 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VcanQ62059 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VcanQ62059 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VcanQ62059 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
VcanQ62059 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
VcanQ62059 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
VcanQ62059 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
VcanQ62059 Gm20426-201ENSMUST00000173657 440 ntBASIC13.19□□□□□ -0.3
VcanQ62059 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC13.19□□□□□ -0.3
VcanQ62059 AC140293.1-201ENSMUST00000225626 1247 ntBASIC13.19□□□□□ -0.3
VcanQ62059 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
VcanQ62059 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
VcanQ62059 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
VcanQ62059 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
VcanQ62059 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC13.18□□□□□ -0.3
VcanQ62059 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VcanQ62059 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VcanQ62059 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC13.18□□□□□ -0.3
VcanQ62059 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
VcanQ62059 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
VcanQ62059 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VcanQ62059 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
VcanQ62059 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VcanQ62059 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
VcanQ62059 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VcanQ62059 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
VcanQ62059 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
VcanQ62059 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
VcanQ62059 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
VcanQ62059 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
VcanQ62059 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
VcanQ62059 Gm7029-201ENSMUST00000173226 450 ntBASIC13.18□□□□□ -0.3
VcanQ62059 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
VcanQ62059 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VcanQ62059 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC13.18□□□□□ -0.3
VcanQ62059 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VcanQ62059 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
VcanQ62059 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
VcanQ62059 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VcanQ62059 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC13.18□□□□□ -0.3
VcanQ62059 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC13.18□□□□□ -0.3
VcanQ62059 Gm4271-201ENSMUST00000174444 973 ntBASIC13.18□□□□□ -0.3
VcanQ62059 Gm9124-201ENSMUST00000191789 1092 ntBASIC13.18□□□□□ -0.3
VcanQ62059 Gm9113-201ENSMUST00000192510 1018 ntBASIC13.18□□□□□ -0.3
VcanQ62059 Gm9131-201ENSMUST00000193557 1089 ntBASIC13.18□□□□□ -0.3
VcanQ62059 Gm9121-201ENSMUST00000193749 1071 ntBASIC13.18□□□□□ -0.3
VcanQ62059 Gm18584-201ENSMUST00000203098 964 ntBASIC13.18□□□□□ -0.3
VcanQ62059 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC13.18□□□□□ -0.3
VcanQ62059 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VcanQ62059 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC13.18□□□□□ -0.3
VcanQ62059 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
VcanQ62059 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
VcanQ62059 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VcanQ62059 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
VcanQ62059 Gm11839-201ENSMUST00000120647 1953 ntBASIC13.17□□□□□ -0.3
VcanQ62059 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VcanQ62059 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VcanQ62059 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VcanQ62059 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VcanQ62059 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC13.17□□□□□ -0.3
VcanQ62059 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VcanQ62059 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VcanQ62059 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VcanQ62059 Celf4-206ENSMUST00000224553 1729 ntBASIC13.17□□□□□ -0.3
VcanQ62059 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VcanQ62059 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
VcanQ62059 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC13.17□□□□□ -0.3
VcanQ62059 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
VcanQ62059 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VcanQ62059 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VcanQ62059 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VcanQ62059 Gm14017-201ENSMUST00000121934 386 ntBASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms