Protein–RNA interactions for Protein: Q61508

Ecm1, Extracellular matrix protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ecm1Q61508 Gm11557-201ENSMUST00000120200 1008 ntBASIC15.77■□□□□ 0.12
Ecm1Q61508 Gm15376-201ENSMUST00000122258 783 ntBASIC15.77■□□□□ 0.12
Ecm1Q61508 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC15.77■□□□□ 0.12
Ecm1Q61508 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC15.77■□□□□ 0.12
Ecm1Q61508 Gm8927-201ENSMUST00000181978 981 ntBASIC15.77■□□□□ 0.12
Ecm1Q61508 Gm27486-201ENSMUST00000184923 80 ntBASIC15.77■□□□□ 0.12
Ecm1Q61508 Gm7287-201ENSMUST00000205267 602 ntBASIC15.77■□□□□ 0.12
Ecm1Q61508 Gm3222-201ENSMUST00000071282 990 ntBASIC15.77■□□□□ 0.12
Ecm1Q61508 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Ecm1Q61508 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ecm1Q61508 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ecm1Q61508 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ecm1Q61508 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ecm1Q61508 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.11
Ecm1Q61508 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ecm1Q61508 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ecm1Q61508 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ecm1Q61508 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ecm1Q61508 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Ecm1Q61508 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ecm1Q61508 AL645783.1-201ENSMUST00000221416 1832 ntBASIC15.76■□□□□ 0.11
Ecm1Q61508 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ecm1Q61508 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ecm1Q61508 Gm12742-201ENSMUST00000117326 410 ntBASIC15.76■□□□□ 0.11
Ecm1Q61508 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC15.76■□□□□ 0.11
Ecm1Q61508 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC15.76■□□□□ 0.11
Ecm1Q61508 Gm26464-201ENSMUST00000157094 305 ntBASIC15.76■□□□□ 0.11
Ecm1Q61508 Gm24420-201ENSMUST00000176676 59 ntBASIC15.76■□□□□ 0.11
Ecm1Q61508 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC15.76■□□□□ 0.11
Ecm1Q61508 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC15.76■□□□□ 0.11
Ecm1Q61508 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ecm1Q61508 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ecm1Q61508 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ecm1Q61508 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ecm1Q61508 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ecm1Q61508 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC15.76■□□□□ 0.11
Ecm1Q61508 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ecm1Q61508 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ecm1Q61508 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ecm1Q61508 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ecm1Q61508 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Ecm1Q61508 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ecm1Q61508 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ecm1Q61508 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ecm1Q61508 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Ecm1Q61508 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ecm1Q61508 Gm12928-201ENSMUST00000117115 573 ntBASIC15.75■□□□□ 0.11
Ecm1Q61508 Gm13226-201ENSMUST00000117838 404 ntBASIC15.75■□□□□ 0.11
Ecm1Q61508 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC15.75■□□□□ 0.11
Ecm1Q61508 Ighv1-51-201ENSMUST00000192903 354 ntBASIC15.75■□□□□ 0.11
Ecm1Q61508 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ecm1Q61508 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC15.75■□□□□ 0.11
Ecm1Q61508 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC15.75■□□□□ 0.11
Ecm1Q61508 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC15.75■□□□□ 0.11
Ecm1Q61508 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Ecm1Q61508 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ecm1Q61508 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ecm1Q61508 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC15.75■□□□□ 0.11
Ecm1Q61508 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC15.75■□□□□ 0.11
Ecm1Q61508 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ecm1Q61508 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ecm1Q61508 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC15.75■□□□□ 0.11
Ecm1Q61508 Gm9200-201ENSMUST00000118513 1354 ntBASIC15.75■□□□□ 0.11
Ecm1Q61508 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ecm1Q61508 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ecm1Q61508 Gm8775-201ENSMUST00000170943 1327 ntBASIC15.74■□□□□ 0.11
Ecm1Q61508 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ecm1Q61508 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ecm1Q61508 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ecm1Q61508 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ecm1Q61508 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ecm1Q61508 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ecm1Q61508 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
Ecm1Q61508 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ecm1Q61508 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ecm1Q61508 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC15.74■□□□□ 0.11
Ecm1Q61508 Gm12957-201ENSMUST00000117835 377 ntBASIC15.74■□□□□ 0.11
Ecm1Q61508 Gm11814-201ENSMUST00000119515 929 ntBASIC15.74■□□□□ 0.11
Ecm1Q61508 Gm12416-201ENSMUST00000120911 1008 ntBASIC15.74■□□□□ 0.11
Ecm1Q61508 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC15.74■□□□□ 0.11
Ecm1Q61508 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC15.74■□□□□ 0.11
Ecm1Q61508 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ecm1Q61508 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ecm1Q61508 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ecm1Q61508 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC15.74■□□□□ 0.11
Ecm1Q61508 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ecm1Q61508 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC15.74■□□□□ 0.11
Ecm1Q61508 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC15.73■□□□□ 0.11
Ecm1Q61508 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ecm1Q61508 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Ecm1Q61508 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC15.73■□□□□ 0.11
Ecm1Q61508 Gm4081-201ENSMUST00000195287 1838 ntBASIC15.73■□□□□ 0.11
Ecm1Q61508 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ecm1Q61508 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ecm1Q61508 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ecm1Q61508 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ecm1Q61508 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ecm1Q61508 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ecm1Q61508 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ecm1Q61508 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms