Protein–RNA interactions for Protein: Q61467

Zic4, Zinc finger protein ZIC 4, mousemouse

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zic4Q61467 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Zic4Q61467 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Zic4Q61467 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Zic4Q61467 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Zic4Q61467 Gm12644-201ENSMUST00000119935 606 ntBASIC11.61□□□□□ -0.55
Zic4Q61467 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC11.61□□□□□ -0.55
Zic4Q61467 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC11.61□□□□□ -0.55
Zic4Q61467 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC11.61□□□□□ -0.55
Zic4Q61467 Gm25925-201ENSMUST00000158314 306 ntBASIC11.61□□□□□ -0.55
Zic4Q61467 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Zic4Q61467 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC11.61□□□□□ -0.55
Zic4Q61467 Gm4535-201ENSMUST00000182274 558 ntBASIC11.61□□□□□ -0.55
Zic4Q61467 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Zic4Q61467 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Zic4Q61467 Gm10355-201ENSMUST00000097146 517 ntBASIC11.61□□□□□ -0.55
Zic4Q61467 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Zic4Q61467 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Zic4Q61467 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Zic4Q61467 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Zic4Q61467 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Zic4Q61467 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Zic4Q61467 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Zic4Q61467 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Zic4Q61467 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Zic4Q61467 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Zic4Q61467 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Zic4Q61467 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Zic4Q61467 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Zic4Q61467 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
Zic4Q61467 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Zic4Q61467 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Zic4Q61467 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Zic4Q61467 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Zic4Q61467 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Zic4Q61467 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Zic4Q61467 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Zic4Q61467 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Zic4Q61467 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Zic4Q61467 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Zic4Q61467 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC11.6□□□□□ -0.55
Zic4Q61467 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Zic4Q61467 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Zic4Q61467 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Zic4Q61467 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Zic4Q61467 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Zic4Q61467 AC153366.2-201ENSMUST00000219461 1984 ntBASIC11.6□□□□□ -0.55
Zic4Q61467 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Zic4Q61467 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Zic4Q61467 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Zic4Q61467 Best4-ps-201ENSMUST00000129783 1380 ntBASIC11.6□□□□□ -0.55
Zic4Q61467 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Zic4Q61467 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Zic4Q61467 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Zic4Q61467 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Zic4Q61467 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Zic4Q61467 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Zic4Q61467 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Zic4Q61467 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC11.6□□□□□ -0.55
Zic4Q61467 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Zic4Q61467 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC11.6□□□□□ -0.55
Zic4Q61467 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC11.6□□□□□ -0.55
Zic4Q61467 Mir6982-201ENSMUST00000184354 68 ntBASIC11.6□□□□□ -0.55
Zic4Q61467 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC11.6□□□□□ -0.55
Zic4Q61467 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Zic4Q61467 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Zic4Q61467 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Zic4Q61467 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Zic4Q61467 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Zic4Q61467 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Zic4Q61467 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Zic4Q61467 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Zic4Q61467 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC11.6□□□□□ -0.55
Zic4Q61467 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Zic4Q61467 Gm3928-201ENSMUST00000121141 1307 ntBASIC11.6□□□□□ -0.55
Zic4Q61467 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Zic4Q61467 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Zic4Q61467 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC11.59□□□□□ -0.55
Zic4Q61467 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Zic4Q61467 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Zic4Q61467 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Zic4Q61467 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Zic4Q61467 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Zic4Q61467 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Zic4Q61467 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Zic4Q61467 AC164565.1-201ENSMUST00000217520 1484 ntBASIC11.59□□□□□ -0.55
Zic4Q61467 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Zic4Q61467 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Zic4Q61467 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Zic4Q61467 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Zic4Q61467 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Zic4Q61467 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Zic4Q61467 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Zic4Q61467 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Zic4Q61467 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC11.59□□□□□ -0.55
Zic4Q61467 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Zic4Q61467 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Zic4Q61467 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
Zic4Q61467 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Zic4Q61467 Gm6659-201ENSMUST00000174752 547 ntBASIC11.59□□□□□ -0.55
Zic4Q61467 Gm6944-201ENSMUST00000182449 1006 ntBASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms