Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC11.16□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC11.16□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC11.16□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Gm27357-201ENSMUST00000183754 135 ntBASIC11.16□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 AC121577.1-201ENSMUST00000227302 707 ntBASIC11.16□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC11.16□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC11.16□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC11.16□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC11.16□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC11.15□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC11.15□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC11.15□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC11.15□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC11.15□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Gm6944-201ENSMUST00000182449 1006 ntBASIC11.15□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Gm27704-201ENSMUST00000185094 107 ntBASIC11.15□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC11.15□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Gm10252-201ENSMUST00000209541 832 ntBASIC11.15□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC11.15□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC11.15□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC11.15□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Gm6198-201ENSMUST00000191337 2929 ntBASIC11.15□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Gm9947-201ENSMUST00000067599 2920 ntBASIC11.15□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC11.15□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms