Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn2bQ56A07 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn2bQ56A07 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn2bQ56A07 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC14.19□□□□□ -0.14
Scn2bQ56A07 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Scn2bQ56A07 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn2bQ56A07 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn2bQ56A07 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Scn2bQ56A07 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Scn2bQ56A07 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn2bQ56A07 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn2bQ56A07 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn2bQ56A07 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn2bQ56A07 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC14.19□□□□□ -0.14
Scn2bQ56A07 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Scn2bQ56A07 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn2bQ56A07 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn2bQ56A07 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Scn2bQ56A07 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Scn2bQ56A07 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn2bQ56A07 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn2bQ56A07 Gm26513-201ENSMUST00000181802 2489 ntBASIC14.18□□□□□ -0.14
Scn2bQ56A07 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn2bQ56A07 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC14.18□□□□□ -0.14
Scn2bQ56A07 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Scn2bQ56A07 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Scn2bQ56A07 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Scn2bQ56A07 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.18□□□□□ -0.14
Scn2bQ56A07 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Scn2bQ56A07 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC14.18□□□□□ -0.14
Scn2bQ56A07 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn2bQ56A07 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC14.18□□□□□ -0.14
Scn2bQ56A07 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Scn2bQ56A07 Gm44945-201ENSMUST00000206764 1187 ntBASIC14.18□□□□□ -0.14
Scn2bQ56A07 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn2bQ56A07 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn2bQ56A07 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn2bQ56A07 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn2bQ56A07 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn2bQ56A07 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC14.18□□□□□ -0.14
Scn2bQ56A07 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn2bQ56A07 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Scn2bQ56A07 Gm30238-201ENSMUST00000195528 2603 ntBASIC14.18□□□□□ -0.14
Scn2bQ56A07 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Scn2bQ56A07 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn2bQ56A07 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn2bQ56A07 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn2bQ56A07 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Scn2bQ56A07 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn2bQ56A07 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn2bQ56A07 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn2bQ56A07 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn2bQ56A07 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn2bQ56A07 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn2bQ56A07 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn2bQ56A07 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn2bQ56A07 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn2bQ56A07 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Scn2bQ56A07 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn2bQ56A07 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn2bQ56A07 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.17□□□□□ -0.14
Scn2bQ56A07 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Scn2bQ56A07 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Scn2bQ56A07 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn2bQ56A07 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
Scn2bQ56A07 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn2bQ56A07 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Scn2bQ56A07 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn2bQ56A07 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn2bQ56A07 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn2bQ56A07 Gm9252-201ENSMUST00000172364 1602 ntBASIC14.17□□□□□ -0.14
Scn2bQ56A07 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Scn2bQ56A07 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Scn2bQ56A07 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn2bQ56A07 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn2bQ56A07 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn2bQ56A07 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC14.17□□□□□ -0.14
Scn2bQ56A07 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC14.17□□□□□ -0.14
Scn2bQ56A07 Gm27301-201ENSMUST00000184012 127 ntBASIC14.17□□□□□ -0.14
Scn2bQ56A07 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC14.17□□□□□ -0.14
Scn2bQ56A07 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn2bQ56A07 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn2bQ56A07 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn2bQ56A07 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
Scn2bQ56A07 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn2bQ56A07 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn2bQ56A07 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn2bQ56A07 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn2bQ56A07 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Scn2bQ56A07 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn2bQ56A07 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Scn2bQ56A07 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn2bQ56A07 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn2bQ56A07 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
Scn2bQ56A07 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC14.16□□□□□ -0.14
Scn2bQ56A07 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn2bQ56A07 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Scn2bQ56A07 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn2bQ56A07 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn2bQ56A07 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms