Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Gm15460-201ENSMUST00000118147 391 ntBASIC16.66■□□□□ 0.26
Ddx49Q4FZF3 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ddx49Q4FZF3 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC16.66■□□□□ 0.26
Ddx49Q4FZF3 Mir1982-201ENSMUST00000157368 74 ntBASIC16.66■□□□□ 0.26
Ddx49Q4FZF3 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Ddx49Q4FZF3 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC16.66■□□□□ 0.26
Ddx49Q4FZF3 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC16.66■□□□□ 0.26
Ddx49Q4FZF3 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC16.66■□□□□ 0.26
Ddx49Q4FZF3 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC16.66■□□□□ 0.26
Ddx49Q4FZF3 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Ddx49Q4FZF3 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ddx49Q4FZF3 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ddx49Q4FZF3 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ddx49Q4FZF3 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ddx49Q4FZF3 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ddx49Q4FZF3 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Ddx49Q4FZF3 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ddx49Q4FZF3 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Ddx49Q4FZF3 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx49Q4FZF3 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx49Q4FZF3 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
Ddx49Q4FZF3 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC16.65■□□□□ 0.26
Ddx49Q4FZF3 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx49Q4FZF3 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Ddx49Q4FZF3 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx49Q4FZF3 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx49Q4FZF3 Gm5303-201ENSMUST00000117943 1252 ntBASIC16.65■□□□□ 0.26
Ddx49Q4FZF3 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx49Q4FZF3 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx49Q4FZF3 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Ddx49Q4FZF3 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC16.65■□□□□ 0.26
Ddx49Q4FZF3 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC16.65■□□□□ 0.26
Ddx49Q4FZF3 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx49Q4FZF3 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC16.65■□□□□ 0.26
Ddx49Q4FZF3 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC16.65■□□□□ 0.26
Ddx49Q4FZF3 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC16.65■□□□□ 0.26
Ddx49Q4FZF3 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx49Q4FZF3 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx49Q4FZF3 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx49Q4FZF3 AC166574.6-201ENSMUST00000227889 1806 ntBASIC16.65■□□□□ 0.26
Ddx49Q4FZF3 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx49Q4FZF3 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Ddx49Q4FZF3 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC16.65■□□□□ 0.26
Ddx49Q4FZF3 Gm45667-201ENSMUST00000210380 1316 ntBASIC16.65■□□□□ 0.26
Ddx49Q4FZF3 AC114008.2-201ENSMUST00000227699 1347 ntBASIC16.65■□□□□ 0.26
Ddx49Q4FZF3 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx49Q4FZF3 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC16.65■□□□□ 0.26
Ddx49Q4FZF3 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx49Q4FZF3 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Ddx49Q4FZF3 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx49Q4FZF3 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx49Q4FZF3 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx49Q4FZF3 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
Ddx49Q4FZF3 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ddx49Q4FZF3 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ddx49Q4FZF3 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ddx49Q4FZF3 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Ddx49Q4FZF3 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC16.64■□□□□ 0.25
Ddx49Q4FZF3 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ddx49Q4FZF3 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ddx49Q4FZF3 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ddx49Q4FZF3 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
Ddx49Q4FZF3 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Ddx49Q4FZF3 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ddx49Q4FZF3 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC16.64■□□□□ 0.25
Ddx49Q4FZF3 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ddx49Q4FZF3 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ddx49Q4FZF3 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
Ddx49Q4FZF3 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ddx49Q4FZF3 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ddx49Q4FZF3 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ddx49Q4FZF3 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Ddx49Q4FZF3 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ddx49Q4FZF3 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ddx49Q4FZF3 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC16.64■□□□□ 0.25
Ddx49Q4FZF3 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ddx49Q4FZF3 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ddx49Q4FZF3 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx49Q4FZF3 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx49Q4FZF3 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx49Q4FZF3 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx49Q4FZF3 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Ddx49Q4FZF3 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx49Q4FZF3 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx49Q4FZF3 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Ddx49Q4FZF3 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx49Q4FZF3 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Ddx49Q4FZF3 Gm9726-201ENSMUST00000180321 678 ntBASIC16.63■□□□□ 0.25
Ddx49Q4FZF3 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx49Q4FZF3 AC155252.1-201ENSMUST00000226462 1208 ntBASIC16.63■□□□□ 0.25
Ddx49Q4FZF3 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx49Q4FZF3 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Ddx49Q4FZF3 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx49Q4FZF3 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx49Q4FZF3 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx49Q4FZF3 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx49Q4FZF3 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx49Q4FZF3 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx49Q4FZF3 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx49Q4FZF3 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms