Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Prpf38aQ4FK66 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC16.72■□□□□ 0.27
Prpf38aQ4FK66 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Prpf38aQ4FK66 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Prpf38aQ4FK66 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
Prpf38aQ4FK66 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Prpf38aQ4FK66 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Prpf38aQ4FK66 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Prpf38aQ4FK66 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Prpf38aQ4FK66 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Prpf38aQ4FK66 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Prpf38aQ4FK66 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Prpf38aQ4FK66 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC16.71■□□□□ 0.27
Prpf38aQ4FK66 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC16.71■□□□□ 0.27
Prpf38aQ4FK66 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC16.71■□□□□ 0.27
Prpf38aQ4FK66 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Prpf38aQ4FK66 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC16.71■□□□□ 0.27
Prpf38aQ4FK66 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC16.71■□□□□ 0.27
Prpf38aQ4FK66 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Prpf38aQ4FK66 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Prpf38aQ4FK66 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC16.71■□□□□ 0.27
Prpf38aQ4FK66 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC16.71■□□□□ 0.27
Prpf38aQ4FK66 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Prpf38aQ4FK66 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Prpf38aQ4FK66 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC16.71■□□□□ 0.27
Prpf38aQ4FK66 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Prpf38aQ4FK66 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC16.71■□□□□ 0.27
Prpf38aQ4FK66 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Prpf38aQ4FK66 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Prpf38aQ4FK66 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Prpf38aQ4FK66 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Prpf38aQ4FK66 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Prpf38aQ4FK66 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Prpf38aQ4FK66 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Prpf38aQ4FK66 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Prpf38aQ4FK66 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Prpf38aQ4FK66 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Prpf38aQ4FK66 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Prpf38aQ4FK66 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
Prpf38aQ4FK66 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Prpf38aQ4FK66 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
Prpf38aQ4FK66 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Prpf38aQ4FK66 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC16.7■□□□□ 0.26
Prpf38aQ4FK66 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Prpf38aQ4FK66 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Prpf38aQ4FK66 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC16.7■□□□□ 0.26
Prpf38aQ4FK66 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC16.7■□□□□ 0.26
Prpf38aQ4FK66 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Prpf38aQ4FK66 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Prpf38aQ4FK66 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Prpf38aQ4FK66 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Prpf38aQ4FK66 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC16.7■□□□□ 0.26
Prpf38aQ4FK66 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Prpf38aQ4FK66 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Prpf38aQ4FK66 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Prpf38aQ4FK66 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC16.7■□□□□ 0.26
Prpf38aQ4FK66 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC16.7■□□□□ 0.26
Prpf38aQ4FK66 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Prpf38aQ4FK66 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC16.7■□□□□ 0.26
Prpf38aQ4FK66 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Prpf38aQ4FK66 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC16.7■□□□□ 0.26
Prpf38aQ4FK66 AL593843.1-201ENSMUST00000195891 145 ntBASIC16.7■□□□□ 0.26
Prpf38aQ4FK66 AC102291.3-201ENSMUST00000226566 405 ntBASIC16.7■□□□□ 0.26
Prpf38aQ4FK66 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC16.7■□□□□ 0.26
Prpf38aQ4FK66 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Prpf38aQ4FK66 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Prpf38aQ4FK66 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Prpf38aQ4FK66 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Prpf38aQ4FK66 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Prpf38aQ4FK66 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Prpf38aQ4FK66 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Prpf38aQ4FK66 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Prpf38aQ4FK66 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Prpf38aQ4FK66 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC16.69■□□□□ 0.26
Prpf38aQ4FK66 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Prpf38aQ4FK66 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Prpf38aQ4FK66 AC154846.1-201ENSMUST00000226278 862 ntBASIC16.69■□□□□ 0.26
Prpf38aQ4FK66 Gm9797-201ENSMUST00000052902 613 ntBASIC16.69■□□□□ 0.26
Prpf38aQ4FK66 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Prpf38aQ4FK66 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Prpf38aQ4FK66 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC16.69■□□□□ 0.26
Prpf38aQ4FK66 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Prpf38aQ4FK66 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC16.69■□□□□ 0.26
Prpf38aQ4FK66 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Prpf38aQ4FK66 Gm9768-201ENSMUST00000206007 2861 ntBASIC16.69■□□□□ 0.26
Prpf38aQ4FK66 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Prpf38aQ4FK66 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Prpf38aQ4FK66 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC16.69■□□□□ 0.26
Prpf38aQ4FK66 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC16.69■□□□□ 0.26
Prpf38aQ4FK66 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Prpf38aQ4FK66 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Prpf38aQ4FK66 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Prpf38aQ4FK66 Ldb3-207ENSMUST00000227819 1499 ntBASIC16.68■□□□□ 0.26
Prpf38aQ4FK66 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Prpf38aQ4FK66 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Prpf38aQ4FK66 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Prpf38aQ4FK66 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Prpf38aQ4FK66 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Prpf38aQ4FK66 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Prpf38aQ4FK66 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms