Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdkl5Q3UTQ8 Nupl1-207ENSMUST00000225311 2475 ntBASIC16.62■□□□□ 0.25
Cdkl5Q3UTQ8 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdkl5Q3UTQ8 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdkl5Q3UTQ8 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdkl5Q3UTQ8 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cdkl5Q3UTQ8 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdkl5Q3UTQ8 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC16.62■□□□□ 0.25
Cdkl5Q3UTQ8 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdkl5Q3UTQ8 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Cdkl5Q3UTQ8 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdkl5Q3UTQ8 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdkl5Q3UTQ8 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdkl5Q3UTQ8 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdkl5Q3UTQ8 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdkl5Q3UTQ8 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdkl5Q3UTQ8 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdkl5Q3UTQ8 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdkl5Q3UTQ8 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
Cdkl5Q3UTQ8 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Cdkl5Q3UTQ8 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cdkl5Q3UTQ8 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cdkl5Q3UTQ8 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC16.61■□□□□ 0.25
Cdkl5Q3UTQ8 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cdkl5Q3UTQ8 Gm9824-201ENSMUST00000178707 561 ntBASIC16.61■□□□□ 0.25
Cdkl5Q3UTQ8 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Cdkl5Q3UTQ8 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdkl5Q3UTQ8 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdkl5Q3UTQ8 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cdkl5Q3UTQ8 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Cdkl5Q3UTQ8 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdkl5Q3UTQ8 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdkl5Q3UTQ8 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cdkl5Q3UTQ8 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdkl5Q3UTQ8 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Cdkl5Q3UTQ8 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdkl5Q3UTQ8 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdkl5Q3UTQ8 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdkl5Q3UTQ8 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Cdkl5Q3UTQ8 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cdkl5Q3UTQ8 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdkl5Q3UTQ8 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cdkl5Q3UTQ8 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cdkl5Q3UTQ8 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cdkl5Q3UTQ8 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdkl5Q3UTQ8 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdkl5Q3UTQ8 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Cdkl5Q3UTQ8 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Cdkl5Q3UTQ8 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdkl5Q3UTQ8 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cdkl5Q3UTQ8 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cdkl5Q3UTQ8 Gm12882-201ENSMUST00000121696 517 ntBASIC16.6■□□□□ 0.25
Cdkl5Q3UTQ8 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC16.6■□□□□ 0.25
Cdkl5Q3UTQ8 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC16.6■□□□□ 0.25
Cdkl5Q3UTQ8 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdkl5Q3UTQ8 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Cdkl5Q3UTQ8 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cdkl5Q3UTQ8 Gm29310-201ENSMUST00000185468 696 ntBASIC16.6■□□□□ 0.25
Cdkl5Q3UTQ8 Gm21825-201ENSMUST00000185728 696 ntBASIC16.6■□□□□ 0.25
Cdkl5Q3UTQ8 Gm29109-201ENSMUST00000185895 696 ntBASIC16.6■□□□□ 0.25
Cdkl5Q3UTQ8 Gm21896-201ENSMUST00000186520 696 ntBASIC16.6■□□□□ 0.25
Cdkl5Q3UTQ8 Gm21873-201ENSMUST00000186728 696 ntBASIC16.6■□□□□ 0.25
Cdkl5Q3UTQ8 Gm21794-201ENSMUST00000187056 696 ntBASIC16.6■□□□□ 0.25
Cdkl5Q3UTQ8 Gm21880-201ENSMUST00000187275 696 ntBASIC16.6■□□□□ 0.25
Cdkl5Q3UTQ8 Gm21826-201ENSMUST00000187451 696 ntBASIC16.6■□□□□ 0.25
Cdkl5Q3UTQ8 Gm21198-201ENSMUST00000188393 696 ntBASIC16.6■□□□□ 0.25
Cdkl5Q3UTQ8 Gm21749-201ENSMUST00000189343 696 ntBASIC16.6■□□□□ 0.25
Cdkl5Q3UTQ8 Gm21901-201ENSMUST00000189568 696 ntBASIC16.6■□□□□ 0.25
Cdkl5Q3UTQ8 Gm29424-201ENSMUST00000189716 696 ntBASIC16.6■□□□□ 0.25
Cdkl5Q3UTQ8 Gm28599-201ENSMUST00000189838 694 ntBASIC16.6■□□□□ 0.25
Cdkl5Q3UTQ8 Gm21867-201ENSMUST00000189917 696 ntBASIC16.6■□□□□ 0.25
Cdkl5Q3UTQ8 Gm29269-201ENSMUST00000190087 696 ntBASIC16.6■□□□□ 0.25
Cdkl5Q3UTQ8 Gm21722-201ENSMUST00000190153 696 ntBASIC16.6■□□□□ 0.25
Cdkl5Q3UTQ8 Gm28423-201ENSMUST00000190701 696 ntBASIC16.6■□□□□ 0.25
Cdkl5Q3UTQ8 Gm21899-201ENSMUST00000190745 696 ntBASIC16.6■□□□□ 0.25
Cdkl5Q3UTQ8 Gm21910-201ENSMUST00000191163 696 ntBASIC16.6■□□□□ 0.25
Cdkl5Q3UTQ8 Gm21849-201ENSMUST00000191571 696 ntBASIC16.6■□□□□ 0.25
Cdkl5Q3UTQ8 Gm28678-201ENSMUST00000191593 696 ntBASIC16.6■□□□□ 0.25
Cdkl5Q3UTQ8 Gm20910-201ENSMUST00000193268 696 ntBASIC16.6■□□□□ 0.25
Cdkl5Q3UTQ8 Gm21871-201ENSMUST00000194621 696 ntBASIC16.6■□□□□ 0.25
Cdkl5Q3UTQ8 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC16.6■□□□□ 0.25
Cdkl5Q3UTQ8 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cdkl5Q3UTQ8 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Cdkl5Q3UTQ8 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdkl5Q3UTQ8 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdkl5Q3UTQ8 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Cdkl5Q3UTQ8 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdkl5Q3UTQ8 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdkl5Q3UTQ8 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdkl5Q3UTQ8 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cdkl5Q3UTQ8 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cdkl5Q3UTQ8 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdkl5Q3UTQ8 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cdkl5Q3UTQ8 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC16.6■□□□□ 0.25
Cdkl5Q3UTQ8 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Cdkl5Q3UTQ8 Ssr1-204ENSMUST00000225319 1610 ntBASIC16.59■□□□□ 0.25
Cdkl5Q3UTQ8 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC16.59■□□□□ 0.25
Cdkl5Q3UTQ8 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdkl5Q3UTQ8 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdkl5Q3UTQ8 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms