Protein–RNA interactions for Protein: Q3UP44

Nhlrc4, NHL-repeat-containing protein 4, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc4Q3UP44 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nhlrc4Q3UP44 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nhlrc4Q3UP44 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Nhlrc4Q3UP44 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13.18□□□□□ -0.3
Nhlrc4Q3UP44 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nhlrc4Q3UP44 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nhlrc4Q3UP44 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nhlrc4Q3UP44 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nhlrc4Q3UP44 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nhlrc4Q3UP44 AC167013.2-201ENSMUST00000228520 2684 ntBASIC13.17□□□□□ -0.3
Nhlrc4Q3UP44 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC13.17□□□□□ -0.3
Nhlrc4Q3UP44 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nhlrc4Q3UP44 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nhlrc4Q3UP44 Mmp14-206ENSMUST00000225641 3238 ntBASIC13.17□□□□□ -0.3
Nhlrc4Q3UP44 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nhlrc4Q3UP44 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Nhlrc4Q3UP44 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nhlrc4Q3UP44 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nhlrc4Q3UP44 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nhlrc4Q3UP44 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nhlrc4Q3UP44 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Nhlrc4Q3UP44 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
Nhlrc4Q3UP44 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nhlrc4Q3UP44 Gm24543-201ENSMUST00000103867 82 ntBASIC13.17□□□□□ -0.3
Nhlrc4Q3UP44 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nhlrc4Q3UP44 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nhlrc4Q3UP44 Gm8410-201ENSMUST00000117225 605 ntBASIC13.17□□□□□ -0.3
Nhlrc4Q3UP44 Gm15957-201ENSMUST00000118893 974 ntBASIC13.17□□□□□ -0.3
Nhlrc4Q3UP44 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nhlrc4Q3UP44 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nhlrc4Q3UP44 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nhlrc4Q3UP44 Gm27622-201ENSMUST00000183779 60 ntBASIC13.17□□□□□ -0.3
Nhlrc4Q3UP44 AA619741-201ENSMUST00000195095 646 ntBASIC13.17□□□□□ -0.3
Nhlrc4Q3UP44 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nhlrc4Q3UP44 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Nhlrc4Q3UP44 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nhlrc4Q3UP44 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC13.17□□□□□ -0.3
Nhlrc4Q3UP44 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nhlrc4Q3UP44 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC13.17□□□□□ -0.3
Nhlrc4Q3UP44 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC13.17□□□□□ -0.3
Nhlrc4Q3UP44 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nhlrc4Q3UP44 Gm38102-201ENSMUST00000192791 1935 ntBASIC13.17□□□□□ -0.3
Nhlrc4Q3UP44 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
Nhlrc4Q3UP44 AC115735.4-201ENSMUST00000227460 1944 ntBASIC13.17□□□□□ -0.3
Nhlrc4Q3UP44 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Nhlrc4Q3UP44 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nhlrc4Q3UP44 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nhlrc4Q3UP44 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nhlrc4Q3UP44 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Nhlrc4Q3UP44 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nhlrc4Q3UP44 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nhlrc4Q3UP44 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nhlrc4Q3UP44 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nhlrc4Q3UP44 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nhlrc4Q3UP44 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nhlrc4Q3UP44 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Nhlrc4Q3UP44 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Nhlrc4Q3UP44 Gm9109-201ENSMUST00000120254 1405 ntBASIC13.16□□□□□ -0.3
Nhlrc4Q3UP44 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nhlrc4Q3UP44 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nhlrc4Q3UP44 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nhlrc4Q3UP44 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nhlrc4Q3UP44 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC13.16□□□□□ -0.3
Nhlrc4Q3UP44 Gm27533-201ENSMUST00000183800 152 ntBASIC13.16□□□□□ -0.3
Nhlrc4Q3UP44 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Nhlrc4Q3UP44 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Nhlrc4Q3UP44 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC13.16□□□□□ -0.3
Nhlrc4Q3UP44 AC124732.2-201ENSMUST00000221977 316 ntBASIC13.16□□□□□ -0.3
Nhlrc4Q3UP44 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nhlrc4Q3UP44 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Nhlrc4Q3UP44 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nhlrc4Q3UP44 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nhlrc4Q3UP44 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Nhlrc4Q3UP44 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nhlrc4Q3UP44 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Nhlrc4Q3UP44 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nhlrc4Q3UP44 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Nhlrc4Q3UP44 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nhlrc4Q3UP44 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Nhlrc4Q3UP44 AC121801.1-201ENSMUST00000225363 1899 ntBASIC13.16□□□□□ -0.3
Nhlrc4Q3UP44 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Nhlrc4Q3UP44 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nhlrc4Q3UP44 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nhlrc4Q3UP44 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nhlrc4Q3UP44 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nhlrc4Q3UP44 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nhlrc4Q3UP44 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Nhlrc4Q3UP44 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nhlrc4Q3UP44 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nhlrc4Q3UP44 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nhlrc4Q3UP44 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Nhlrc4Q3UP44 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nhlrc4Q3UP44 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nhlrc4Q3UP44 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nhlrc4Q3UP44 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nhlrc4Q3UP44 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Nhlrc4Q3UP44 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC13.15□□□□□ -0.3
Nhlrc4Q3UP44 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Nhlrc4Q3UP44 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Nhlrc4Q3UP44 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms