Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Cks1brtQ3UNC9 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cks1brtQ3UNC9 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cks1brtQ3UNC9 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cks1brtQ3UNC9 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Cks1brtQ3UNC9 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cks1brtQ3UNC9 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cks1brtQ3UNC9 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cks1brtQ3UNC9 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Cks1brtQ3UNC9 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC10.31□□□□□ -0.76
Cks1brtQ3UNC9 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Cks1brtQ3UNC9 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Cks1brtQ3UNC9 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cks1brtQ3UNC9 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Cks1brtQ3UNC9 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cks1brtQ3UNC9 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cks1brtQ3UNC9 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cks1brtQ3UNC9 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Cks1brtQ3UNC9 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC10.3□□□□□ -0.76
Cks1brtQ3UNC9 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cks1brtQ3UNC9 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cks1brtQ3UNC9 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cks1brtQ3UNC9 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Cks1brtQ3UNC9 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cks1brtQ3UNC9 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cks1brtQ3UNC9 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cks1brtQ3UNC9 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cks1brtQ3UNC9 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cks1brtQ3UNC9 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cks1brtQ3UNC9 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cks1brtQ3UNC9 Gm10698-201ENSMUST00000182663 604 ntBASIC10.3□□□□□ -0.76
Cks1brtQ3UNC9 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Cks1brtQ3UNC9 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Cks1brtQ3UNC9 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cks1brtQ3UNC9 Gm5639-201ENSMUST00000122305 2403 ntBASIC10.3□□□□□ -0.76
Cks1brtQ3UNC9 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cks1brtQ3UNC9 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Cks1brtQ3UNC9 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Cks1brtQ3UNC9 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cks1brtQ3UNC9 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Cks1brtQ3UNC9 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cks1brtQ3UNC9 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cks1brtQ3UNC9 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cks1brtQ3UNC9 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Cks1brtQ3UNC9 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC10.3□□□□□ -0.76
Cks1brtQ3UNC9 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cks1brtQ3UNC9 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Cks1brtQ3UNC9 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cks1brtQ3UNC9 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cks1brtQ3UNC9 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Cks1brtQ3UNC9 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC10.29□□□□□ -0.76
Cks1brtQ3UNC9 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cks1brtQ3UNC9 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cks1brtQ3UNC9 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Cks1brtQ3UNC9 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cks1brtQ3UNC9 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cks1brtQ3UNC9 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC10.29□□□□□ -0.76
Cks1brtQ3UNC9 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Cks1brtQ3UNC9 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cks1brtQ3UNC9 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC10.29□□□□□ -0.76
Cks1brtQ3UNC9 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Cks1brtQ3UNC9 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC10.29□□□□□ -0.76
Cks1brtQ3UNC9 AC159093.1-201ENSMUST00000227779 380 ntBASIC10.29□□□□□ -0.76
Cks1brtQ3UNC9 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cks1brtQ3UNC9 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cks1brtQ3UNC9 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cks1brtQ3UNC9 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Cks1brtQ3UNC9 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cks1brtQ3UNC9 Mxra8os-201ENSMUST00000097740 687 ntBASIC10.29□□□□□ -0.76
Cks1brtQ3UNC9 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cks1brtQ3UNC9 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cks1brtQ3UNC9 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cks1brtQ3UNC9 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cks1brtQ3UNC9 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cks1brtQ3UNC9 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cks1brtQ3UNC9 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Cks1brtQ3UNC9 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cks1brtQ3UNC9 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cks1brtQ3UNC9 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cks1brtQ3UNC9 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cks1brtQ3UNC9 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cks1brtQ3UNC9 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cks1brtQ3UNC9 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC10.29□□□□□ -0.76
Cks1brtQ3UNC9 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cks1brtQ3UNC9 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Cks1brtQ3UNC9 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cks1brtQ3UNC9 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC10.28□□□□□ -0.76
Cks1brtQ3UNC9 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cks1brtQ3UNC9 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Cks1brtQ3UNC9 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cks1brtQ3UNC9 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Cks1brtQ3UNC9 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Cks1brtQ3UNC9 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC10.28□□□□□ -0.76
Cks1brtQ3UNC9 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cks1brtQ3UNC9 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cks1brtQ3UNC9 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cks1brtQ3UNC9 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC10.28□□□□□ -0.76
Cks1brtQ3UNC9 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cks1brtQ3UNC9 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cks1brtQ3UNC9 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 92.3 ms