Protein–RNA interactions for Protein: Q3UH68

Limch1, LIM and calponin homology domains-containing protein 1, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1Q3UH68 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Limch1Q3UH68 Gm45098-201ENSMUST00000207179 657 ntBASIC16.9■□□□□ 0.3
Limch1Q3UH68 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Limch1Q3UH68 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Limch1Q3UH68 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Limch1Q3UH68 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Limch1Q3UH68 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Limch1Q3UH68 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Limch1Q3UH68 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Limch1Q3UH68 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Limch1Q3UH68 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Limch1Q3UH68 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC16.9■□□□□ 0.3
Limch1Q3UH68 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Limch1Q3UH68 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC16.9■□□□□ 0.3
Limch1Q3UH68 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Limch1Q3UH68 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
Limch1Q3UH68 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Limch1Q3UH68 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Limch1Q3UH68 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Limch1Q3UH68 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Limch1Q3UH68 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Limch1Q3UH68 Gm9252-201ENSMUST00000172364 1602 ntBASIC16.89■□□□□ 0.29
Limch1Q3UH68 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Limch1Q3UH68 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Limch1Q3UH68 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Limch1Q3UH68 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Limch1Q3UH68 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC16.89■□□□□ 0.29
Limch1Q3UH68 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Limch1Q3UH68 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Limch1Q3UH68 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Limch1Q3UH68 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC16.89■□□□□ 0.29
Limch1Q3UH68 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC16.89■□□□□ 0.29
Limch1Q3UH68 Gm15483-201ENSMUST00000120338 456 ntBASIC16.89■□□□□ 0.29
Limch1Q3UH68 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Limch1Q3UH68 Gm5479-201ENSMUST00000160578 435 ntBASIC16.89■□□□□ 0.29
Limch1Q3UH68 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Limch1Q3UH68 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC16.89■□□□□ 0.29
Limch1Q3UH68 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC16.89■□□□□ 0.29
Limch1Q3UH68 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Limch1Q3UH68 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Limch1Q3UH68 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Limch1Q3UH68 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Limch1Q3UH68 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Limch1Q3UH68 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC16.89■□□□□ 0.29
Limch1Q3UH68 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Limch1Q3UH68 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Limch1Q3UH68 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Limch1Q3UH68 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Limch1Q3UH68 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC16.89■□□□□ 0.29
Limch1Q3UH68 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Limch1Q3UH68 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC16.88■□□□□ 0.29
Limch1Q3UH68 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Limch1Q3UH68 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Limch1Q3UH68 Gm6973-201ENSMUST00000117080 721 ntBASIC16.88■□□□□ 0.29
Limch1Q3UH68 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC16.88■□□□□ 0.29
Limch1Q3UH68 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Limch1Q3UH68 Gm37230-201ENSMUST00000194491 818 ntBASIC16.88■□□□□ 0.29
Limch1Q3UH68 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Limch1Q3UH68 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Limch1Q3UH68 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Limch1Q3UH68 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Limch1Q3UH68 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Limch1Q3UH68 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Limch1Q3UH68 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Limch1Q3UH68 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Limch1Q3UH68 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Limch1Q3UH68 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Limch1Q3UH68 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Limch1Q3UH68 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Limch1Q3UH68 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC16.87■□□□□ 0.29
Limch1Q3UH68 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Limch1Q3UH68 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Limch1Q3UH68 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
Limch1Q3UH68 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Limch1Q3UH68 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC16.87■□□□□ 0.29
Limch1Q3UH68 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Limch1Q3UH68 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC16.87■□□□□ 0.29
Limch1Q3UH68 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Limch1Q3UH68 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC16.87■□□□□ 0.29
Limch1Q3UH68 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC16.87■□□□□ 0.29
Limch1Q3UH68 Gm5779-201ENSMUST00000218467 910 ntBASIC16.87■□□□□ 0.29
Limch1Q3UH68 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Limch1Q3UH68 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC16.87■□□□□ 0.29
Limch1Q3UH68 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Limch1Q3UH68 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Limch1Q3UH68 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Limch1Q3UH68 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Limch1Q3UH68 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Limch1Q3UH68 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Limch1Q3UH68 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Limch1Q3UH68 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Limch1Q3UH68 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC16.87■□□□□ 0.29
Limch1Q3UH68 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Limch1Q3UH68 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Limch1Q3UH68 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Limch1Q3UH68 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
Limch1Q3UH68 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Limch1Q3UH68 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Limch1Q3UH68 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Limch1Q3UH68 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms