Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Khdc4Q3TCX3 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Khdc4Q3TCX3 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC13.66□□□□□ -0.22
Khdc4Q3TCX3 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Khdc4Q3TCX3 Gm13015-201ENSMUST00000118674 204 ntBASIC13.66□□□□□ -0.22
Khdc4Q3TCX3 Gm8116-201ENSMUST00000182917 1201 ntBASIC13.66□□□□□ -0.22
Khdc4Q3TCX3 Gm27306-201ENSMUST00000183970 107 ntBASIC13.66□□□□□ -0.22
Khdc4Q3TCX3 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Khdc4Q3TCX3 Ighv8-7-201ENSMUST00000194349 297 ntBASIC13.66□□□□□ -0.22
Khdc4Q3TCX3 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Khdc4Q3TCX3 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Khdc4Q3TCX3 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Khdc4Q3TCX3 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Khdc4Q3TCX3 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Khdc4Q3TCX3 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Khdc4Q3TCX3 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Khdc4Q3TCX3 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Khdc4Q3TCX3 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Khdc4Q3TCX3 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Khdc4Q3TCX3 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Khdc4Q3TCX3 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Khdc4Q3TCX3 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Khdc4Q3TCX3 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Khdc4Q3TCX3 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Khdc4Q3TCX3 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Khdc4Q3TCX3 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Khdc4Q3TCX3 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Khdc4Q3TCX3 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Khdc4Q3TCX3 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Khdc4Q3TCX3 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Khdc4Q3TCX3 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Khdc4Q3TCX3 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Khdc4Q3TCX3 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Khdc4Q3TCX3 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Khdc4Q3TCX3 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Khdc4Q3TCX3 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Khdc4Q3TCX3 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Khdc4Q3TCX3 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Khdc4Q3TCX3 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Khdc4Q3TCX3 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Khdc4Q3TCX3 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Khdc4Q3TCX3 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Khdc4Q3TCX3 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Khdc4Q3TCX3 Gm5745-201ENSMUST00000183748 313 ntBASIC13.65□□□□□ -0.22
Khdc4Q3TCX3 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC13.65□□□□□ -0.22
Khdc4Q3TCX3 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC13.65□□□□□ -0.22
Khdc4Q3TCX3 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Khdc4Q3TCX3 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC13.65□□□□□ -0.22
Khdc4Q3TCX3 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Khdc4Q3TCX3 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Khdc4Q3TCX3 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Khdc4Q3TCX3 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC13.65□□□□□ -0.22
Khdc4Q3TCX3 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Khdc4Q3TCX3 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Khdc4Q3TCX3 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Khdc4Q3TCX3 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Khdc4Q3TCX3 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Khdc4Q3TCX3 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Khdc4Q3TCX3 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Khdc4Q3TCX3 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Khdc4Q3TCX3 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Khdc4Q3TCX3 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Khdc4Q3TCX3 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Khdc4Q3TCX3 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Khdc4Q3TCX3 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Khdc4Q3TCX3 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Khdc4Q3TCX3 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Khdc4Q3TCX3 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Khdc4Q3TCX3 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Khdc4Q3TCX3 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Khdc4Q3TCX3 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Khdc4Q3TCX3 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC13.64□□□□□ -0.23
Khdc4Q3TCX3 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Khdc4Q3TCX3 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Khdc4Q3TCX3 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Khdc4Q3TCX3 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Khdc4Q3TCX3 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Khdc4Q3TCX3 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Khdc4Q3TCX3 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Khdc4Q3TCX3 Gm23547-201ENSMUST00000158210 271 ntBASIC13.64□□□□□ -0.23
Khdc4Q3TCX3 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Khdc4Q3TCX3 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC13.64□□□□□ -0.23
Khdc4Q3TCX3 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Khdc4Q3TCX3 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC13.64□□□□□ -0.23
Khdc4Q3TCX3 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC13.64□□□□□ -0.23
Khdc4Q3TCX3 Gm29541-201ENSMUST00000191351 678 ntBASIC13.64□□□□□ -0.23
Khdc4Q3TCX3 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Khdc4Q3TCX3 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Khdc4Q3TCX3 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Khdc4Q3TCX3 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Khdc4Q3TCX3 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Khdc4Q3TCX3 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Khdc4Q3TCX3 Gm10605-202ENSMUST00000183019 3198 ntBASIC13.64□□□□□ -0.23
Khdc4Q3TCX3 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Khdc4Q3TCX3 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC13.64□□□□□ -0.23
Khdc4Q3TCX3 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Khdc4Q3TCX3 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Khdc4Q3TCX3 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Khdc4Q3TCX3 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Khdc4Q3TCX3 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms