Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim63Q38HM4 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim63Q38HM4 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim63Q38HM4 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim63Q38HM4 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC11.82□□□□□ -0.52
Trim63Q38HM4 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim63Q38HM4 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trim63Q38HM4 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim63Q38HM4 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim63Q38HM4 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim63Q38HM4 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim63Q38HM4 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim63Q38HM4 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Trim63Q38HM4 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim63Q38HM4 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim63Q38HM4 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC11.81□□□□□ -0.52
Trim63Q38HM4 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim63Q38HM4 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Trim63Q38HM4 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC11.81□□□□□ -0.52
Trim63Q38HM4 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim63Q38HM4 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim63Q38HM4 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Trim63Q38HM4 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim63Q38HM4 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim63Q38HM4 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim63Q38HM4 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC11.81□□□□□ -0.52
Trim63Q38HM4 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC11.81□□□□□ -0.52
Trim63Q38HM4 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim63Q38HM4 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim63Q38HM4 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim63Q38HM4 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim63Q38HM4 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim63Q38HM4 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim63Q38HM4 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim63Q38HM4 Gm13615-201ENSMUST00000120242 1612 ntBASIC11.81□□□□□ -0.52
Trim63Q38HM4 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Trim63Q38HM4 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Trim63Q38HM4 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trim63Q38HM4 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Trim63Q38HM4 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC11.81□□□□□ -0.52
Trim63Q38HM4 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC11.81□□□□□ -0.52
Trim63Q38HM4 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC11.81□□□□□ -0.52
Trim63Q38HM4 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Trim63Q38HM4 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Trim63Q38HM4 AC125108.1-201ENSMUST00000218986 2330 ntBASIC11.81□□□□□ -0.52
Trim63Q38HM4 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trim63Q38HM4 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim63Q38HM4 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim63Q38HM4 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trim63Q38HM4 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim63Q38HM4 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim63Q38HM4 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim63Q38HM4 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim63Q38HM4 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim63Q38HM4 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim63Q38HM4 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim63Q38HM4 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC11.8□□□□□ -0.52
Trim63Q38HM4 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Trim63Q38HM4 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC11.8□□□□□ -0.52
Trim63Q38HM4 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim63Q38HM4 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Trim63Q38HM4 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Trim63Q38HM4 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim63Q38HM4 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC11.8□□□□□ -0.52
Trim63Q38HM4 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim63Q38HM4 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim63Q38HM4 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Trim63Q38HM4 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim63Q38HM4 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Trim63Q38HM4 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim63Q38HM4 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trim63Q38HM4 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC11.8□□□□□ -0.52
Trim63Q38HM4 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC11.8□□□□□ -0.52
Trim63Q38HM4 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC11.8□□□□□ -0.52
Trim63Q38HM4 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trim63Q38HM4 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim63Q38HM4 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trim63Q38HM4 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC11.8□□□□□ -0.52
Trim63Q38HM4 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Trim63Q38HM4 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Trim63Q38HM4 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC11.8□□□□□ -0.52
Trim63Q38HM4 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim63Q38HM4 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
Trim63Q38HM4 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim63Q38HM4 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trim63Q38HM4 AC121801.1-201ENSMUST00000225363 1899 ntBASIC11.8□□□□□ -0.52
Trim63Q38HM4 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trim63Q38HM4 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC11.8□□□□□ -0.52
Trim63Q38HM4 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim63Q38HM4 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim63Q38HM4 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim63Q38HM4 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim63Q38HM4 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim63Q38HM4 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC11.79□□□□□ -0.52
Trim63Q38HM4 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim63Q38HM4 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim63Q38HM4 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim63Q38HM4 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trim63Q38HM4 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim63Q38HM4 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms