Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Gm28265-201ENSMUST00000188201 2319 ntBASIC12.7□□□□□ -0.38
Chd8Q09XV5 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
Chd8Q09XV5 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chd8Q09XV5 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chd8Q09XV5 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chd8Q09XV5 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Chd8Q09XV5 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chd8Q09XV5 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chd8Q09XV5 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC12.7□□□□□ -0.38
Chd8Q09XV5 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chd8Q09XV5 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chd8Q09XV5 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chd8Q09XV5 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC12.7□□□□□ -0.38
Chd8Q09XV5 Gm9358-201ENSMUST00000183067 927 ntBASIC12.7□□□□□ -0.38
Chd8Q09XV5 Gm8969-201ENSMUST00000199694 526 ntBASIC12.7□□□□□ -0.38
Chd8Q09XV5 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chd8Q09XV5 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chd8Q09XV5 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chd8Q09XV5 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chd8Q09XV5 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chd8Q09XV5 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chd8Q09XV5 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chd8Q09XV5 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chd8Q09XV5 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Chd8Q09XV5 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chd8Q09XV5 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Chd8Q09XV5 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Chd8Q09XV5 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Chd8Q09XV5 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chd8Q09XV5 Gm12012-201ENSMUST00000118857 1066 ntBASIC12.69□□□□□ -0.38
Chd8Q09XV5 Gm6222-202ENSMUST00000182143 629 ntBASIC12.69□□□□□ -0.38
Chd8Q09XV5 Gm9211-201ENSMUST00000182882 975 ntBASIC12.69□□□□□ -0.38
Chd8Q09XV5 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.69□□□□□ -0.38
Chd8Q09XV5 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC12.69□□□□□ -0.38
Chd8Q09XV5 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Chd8Q09XV5 AC123645.1-201ENSMUST00000228469 605 ntBASIC12.69□□□□□ -0.38
Chd8Q09XV5 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Chd8Q09XV5 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
Chd8Q09XV5 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chd8Q09XV5 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chd8Q09XV5 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chd8Q09XV5 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chd8Q09XV5 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Chd8Q09XV5 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC12.69□□□□□ -0.38
Chd8Q09XV5 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chd8Q09XV5 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC12.69□□□□□ -0.38
Chd8Q09XV5 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chd8Q09XV5 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
Chd8Q09XV5 Gm37497-201ENSMUST00000195830 798 ntBASIC12.69□□□□□ -0.38
Chd8Q09XV5 AC154222.2-201ENSMUST00000225848 607 ntBASIC12.69□□□□□ -0.38
Chd8Q09XV5 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chd8Q09XV5 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chd8Q09XV5 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chd8Q09XV5 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chd8Q09XV5 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chd8Q09XV5 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chd8Q09XV5 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Chd8Q09XV5 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chd8Q09XV5 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
Chd8Q09XV5 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chd8Q09XV5 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Chd8Q09XV5 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chd8Q09XV5 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chd8Q09XV5 Gm15276-201ENSMUST00000145953 498 ntBASIC12.68□□□□□ -0.38
Chd8Q09XV5 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Chd8Q09XV5 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chd8Q09XV5 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Chd8Q09XV5 Gm44967-201ENSMUST00000207047 631 ntBASIC12.68□□□□□ -0.38
Chd8Q09XV5 Gm6867-201ENSMUST00000219165 425 ntBASIC12.68□□□□□ -0.38
Chd8Q09XV5 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chd8Q09XV5 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC12.68□□□□□ -0.38
Chd8Q09XV5 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chd8Q09XV5 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chd8Q09XV5 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chd8Q09XV5 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chd8Q09XV5 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chd8Q09XV5 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chd8Q09XV5 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chd8Q09XV5 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chd8Q09XV5 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Chd8Q09XV5 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Chd8Q09XV5 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.68□□□□□ -0.38
Chd8Q09XV5 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Chd8Q09XV5 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chd8Q09XV5 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chd8Q09XV5 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Chd8Q09XV5 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chd8Q09XV5 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Chd8Q09XV5 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Chd8Q09XV5 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Chd8Q09XV5 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Chd8Q09XV5 AC163637.1-201ENSMUST00000215491 1894 ntBASIC12.67□□□□□ -0.38
Chd8Q09XV5 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC12.67□□□□□ -0.38
Chd8Q09XV5 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chd8Q09XV5 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Chd8Q09XV5 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Chd8Q09XV5 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Chd8Q09XV5 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Chd8Q09XV5 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Chd8Q09XV5 Gm23699-201ENSMUST00000158835 135 ntBASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms